Next: cgsave Up: System commands Previous: quietset Contents Index
Sets the verbosity of the output of several commands.
The verbset command is invoked either as:
CG> dsload Data/bc.cg
{1 f2 backcross 20 208 /homes/thomas/carthagene/test/Data/bc.cg}
CG> sem
Map -1 : log10-likelihood = -297.78
-------:
Set : Marker List ...
1 : MS1 MS2 MS3 MS4 MS5 MS6 MS7 MS8 MS9 MS10 MS11 MS12 MS13 MS14 MS15 MS...
CG> verbset 2
CG> sem
Map -1 : log10-likelihood = -297.78, log-e-likelihood = -685.66
-------:
Data Set Number 1 :
Markers Distance Cumulative Distance Theta 2pt
Pos Id name Haldane Haldane Kosambi (%%age) LOD
1 1 MS1 19.5 cM 19.5 cM 16.8 cM 16.2 %% 15.7
2 2 MS2 0.6 cM 20.1 cM 0.6 cM 0.6 %% 47.6
3 3 MS3 5.8 cM 25.9 cM 5.5 cM 5.5 %% 35.1
4 4 MS4 3.7 cM 29.6 cM 3.6 cM 3.5 %% 21.1
5 5 MS5 3.7 cM 33.3 cM 3.6 cM 3.6 %% 15.4
6 6 MS6 1.6 cM 34.9 cM 1.6 cM 1.6 %% 17.3
7 7 MS7 6.7 cM 41.6 cM 6.3 cM 6.3 %% 35.1
8 8 MS8 2.2 cM 43.8 cM 2.2 cM 2.2 %% 40.8
9 9 MS9 3.0 cM 46.8 cM 2.9 cM 2.9 %% 7.2
10 10 MS10 5.4 cM 52.2 cM 5.1 cM 5.1 %% 3.6
11 11 MS11 8.6 cM 60.7 cM 7.9 cM 7.9 %% 10.9
12 12 MS12 0.0 cM 60.7 cM 0.0 cM 0.0 %% 18.7
13 13 MS13 0.0 cM 60.7 cM 0.0 cM 0.0 %% 6.0
14 14 MS14 5.8 cM 66.6 cM 5.5 cM 5.5 %% 0.0
15 15 MS15 4.6 cM 71.1 cM 4.4 cM 4.4 %% 26.6
16 16 MS16 26.1 cM 97.2 cM 21.6 cM 20.3 %% 6.3
17 17 MS17 0.0 cM 97.2 cM 0.0 cM 0.0 %% 16.0
18 18 MS18 4.9 cM 102.1 cM 4.7 cM 4.6 %% 27.1
19 19 MS19 3.0 cM 105.1 cM 2.9 cM 2.9 %% 34.8
20 20 MS20 ---------- ----------
105.1 cM 95.0 cM
20 markers, log10-likelihood = -297.78
log-e-likelihood = -685.66