cg2tsp

Convert current marker selection to TSP.

Synopsis:

The cg2tsp command is invoked either as:

• cg2tsp Options
• cg2tsp FileName

Description:

The cg2tsp command converts the current marker selection and associated genetic / radiated hybrid data into different traveling salesman problems, one for each available criterion. Each file name is a concatenation of a prefix and the FileName parameter. The prefix can be: an empty string for 2-points loglikelihoods, norm for normalized 2-points loglikelihoods, dist for 2-points distances, lod for 2-points LOD criteria, min for minimum 2-points loglikelihoods, max for maximum 2-points loglikelihoods. Resulting files are in the TSPLIB file format.

Arguments:

• Options : -u to obtain the synopsys of the normal use, -h to print a one line description, -H to print a short help.
• FileName: the suffix name of the TSP files.

Example:

...
CG> dsload Data/rh.cg
CG> cg2tsp rh.tsp
...

See also:

• lkh (2.5.8)
• lkhn (2.5.9)
• lkhl (2.5.10)
• lkhd (2.5.11)