Pig QTL Database

Release 55
(Dec 23, 2024)

Curator: Cari Park
Curated: 2015-06-03
Updated: 2024-04-23

Publication # 25886970 Details

Authors:	Sevillano CA, Lopes MS, Harlizius B, Hanenberg EH, Knol EF, Bastiaansen JW (Contact: john.bastiaansen@wur.nl)
Affiliation:	Animal Breeding and Genomics Centre, Wageningen University, PO Box 338, 6700 AH, Wageningen, the Netherlands
Title:	Genome-wide association study using deregressed breeding values for cryptorchidism and scrotal/inguinal hernia in two pig lines
Journal:	Genetics, Selection, Evolution : GSE, 47(1): 18 (2015)	DOI: 10.1186/s12711-015-0096-6
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Cryptorchidism reported for chromosome(s): Chr.1: QTL:55862. Chr.2: QTL:55855. Chr.3: Asso:55863. Chr.4: QTL:55864, QTL:55865. Chr.6: Asso:55866, Asso:55867. Chr.7: Asso:55868, Asso:55869, QTL:55870. Chr.8: Asso:55856, QTL:55857, QTL:55871, QTL:55872, QTL:55873, Asso:55874, Asso:55875. Chr.9: QTL:55876. Chr.10: Asso:55858, Asso:55877, QTL:55878, Asso:55879. Chr.11: QTL:55880, Asso:55881. Chr.13: QTL:55859, Asso:55882, QTL:55883. Chr.14: QTL:55860, Asso:55861, Asso:55884, Asso:55885. Chr.15: Asso:55886. Chr.16: QTL:55887. Chr.17: Asso:55888. Chr.18: Asso:55889. QTL for Scrotal/inguinal hernia reported for chromosome(s): Chr.1: QTL:55895. Chr.2: Asso:55896. Chr.3: QTL:55890. Chr.5: QTL:55891. Chr.7: QTL:55892. Chr.8: Asso:55893. Chr.10: Asso:55897. Chr.13: Asso:55894, QTL:55898. QTL/association Reported by chromosomes: Chr.1 (2), Chr.2 (2), Chr.3 (2), Chr.4 (2), Chr.5 (1), Chr.6 (2), Chr.7 (4), Chr.8 (8), Chr.9 (1), Chr.10 (5), Chr.11 (2), Chr.13 (5), Chr.14 (4), Chr.15 (1), Chr.16 (1), Chr.17 (1), Chr.18 (1). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Sevillano CA, Lopes MS, Harlizius B, Hanenberg EH, Knol EF, Bastiaansen JW (2015). Genome-wide association study using deregressed breeding values for cryptorchidism and scrotal/inguinal hernia in two pig lines. Genetics, Selection, Evolution : GSE, 47(1): 18; Curated into QTLdb on 2015-06-04. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=KnQy1Z1VoJ

Sevillano CA, Lopes MS, Harlizius B, Hanenberg EH, Knol EF, Bastiaansen JW (2015). Genome-wide association study using deregressed breeding values for cryptorchidism and scrotal/inguinal hernia in two pig lines. Genetics, Selection, Evolution : GSE, 47(1): 18; DOI: https://dx.doi.org/10.1186/s12711-015-0096-6

Publication # 25886970 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: