A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 A snapshot of the data:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
1700028N11Rikb location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000018222 15:108516339-108516445   CU463825,CH242-27H3,15:108507390-108518536
(Clone quality: bE27H3 on chr=15; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018242 9:125684749-125684869   CU481895,CH242-502F19,9:125682992-125685561
(Clone quality: bE502F19 on chr=9; Num_of_Contigs=35; )
5S_rRNA   ENSSSCG00000018267 1:276171547-276171651   CU041257,CH242-395C13,1:276166981-276180113
(Clone quality: bE395C13 on chr=1; Num_of_Contigs=10; )
5S_rRNA   ENSSSCG00000019179 X:97099777-97099893 CU928929,CH242-445E7,X:97050124-97103584
(Clone quality: bE445E7 on chr=X; Num_of_Contigs=7; ) 		 
5S_rRNA   ENSSSCG00000018521 1:137931466-137931581   CU062472,CH242-35N5,1:137912426-138069305
(Clone quality: bE35N5 on chr=1; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018223 1:220734475-220734594   CU468068,CH242-365H21,1:220716916-220741234
(Clone quality: bE365H21 on chr=1; Num_of_Contigs=16; )
5S_rRNA   ENSSSCG00000019015 1:10978041-10978159   CU570845,CH242-32I8,1:10963487-10980136
(Clone quality: bE32I8 on chr=1; Num_of_Contigs=10; )
5S_rRNA   ENSSSCG00000018224 14:140475879-140475992   CU633392,CH242-29E19,14:140462349-140518864
(Clone quality: bE29E19 on chr=14; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000019116 17:10042677-10042783   CU856669,CH242-396I7,17:10042347-10046672
(Clone quality: bE396I7 on chr=17; Num_of_Contigs=9; )
5S_rRNA   ENSSSCG00000019117 9:36313849-36313965   CU930036,CH242-311K23,9:36304876-36326286
(Clone quality: bE311K23 on chr=9; Num_of_Contigs=16; )
5S_rRNA   ENSSSCG00000018226 16:70852440-70852536   CU570717,CH242-191P3,16:70847544-70921707
(Clone quality: bE191P3 on chr=16; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000018219 8:32545195-32545287   FP016039,CH242-161I20,8:32538330-32551779
(Clone quality: bE161I20 on chr=8; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000019670 13:76450702-76450815   CU914809,CH242-61A24,13:76439987-76459488
(Clone quality: bE61A24 on chr=13; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000019344 11:64386967-64387082   CU633813,CH242-267B4,11:64380989-64418055
(Clone quality: bE267B4 on chr=11; Num_of_Contigs=16; )
5S_rRNA   ENSSSCG00000019458 15:64378281-64378390   CU466543,CH242-517B13,15:64368328-64379674
(No clone quality info on )
5S_rRNA   ENSSSCG00000018405 2:81368236-81368349   CU855516,CH242-264F14,2:81296406-81478555
(Clone quality: bE264F14 on chr=2; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000019448 6:43268883-43269009   FP245399,CH242-395N22,6:43260358-43277571
(Clone quality: bE395N22 on chr=6; Num_of_Contigs=7; )
5S_rRNA   ENSSSCG00000019577 8:71460851-71460963   CU914727,CH242-90H5,8:71438750-71470903
(Clone quality: bE90H5 on chr=8; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000019611 2:56542481-56542595   CU467894,CH242-250L18,2:56479706-56598628
(Clone quality: bE250L18 on chr=2; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018551 6:103769473-103769603   CU457759,CH242-261B4,6:103715670-103779620
(Clone quality: bE261B4 on chr=6; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000018119 1:97528140-97528248   FP102323,CH242-235J13,1:97526792-97569279
(Clone quality: bE235J13 on chr=1; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018272 12:41234972-41235096   FP016089,CH242-119K20,12:41221943-41257556
(Clone quality: bE119K20 on chr=12; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000019023 6:57549980-57550089   FP236394,CH242-241E3,6:57543304-57556128
(Clone quality: bE241E3 on chr=6; Num_of_Contigs=13; )
5S_rRNA   ENSSSCG00000018150 16:45030080-45030198   FP103012,CH242-101B11,16:45024660-45033162
(Clone quality: bE101B11 on chr=16; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018750 5:82216484-82216601   CU896549,CH242-102O23,5:82171838-82216702
(Clone quality: bE102O23 on chr=5; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000019187 14:44064499-44064618   CU407050,CH242-231C9,14:44041156-44092712
(Clone quality: bE231C9 on chr=14; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000018484 4:84259711-84259830   CU407291,CH242-513E17,4:84256607-84284155
(Clone quality: bE513E17 on chr=4; Num_of_Contigs=7; )
5S_rRNA   ENSSSCG00000018464 7:75954841-75954934 CT737415,CH242-158E1,7:75875163-76052284
(Clone quality: bE158E1 on chr=7; Num_of_Contigs=2; ) 		 
5S_rRNA   ENSSSCG00000018348 4:93028125-93028233   CU137698,CH242-71N12,4:93022736-93028805
(Clone quality: bE71N12 on chr=4; Num_of_Contigs=19; )
5S_rRNA   ENSSSCG00000018358 6:114504836-114504951   CU657962,CH242-239M20,6:114446586-114584701
(Clone quality: bE239M20 on chr=6; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000019316 10:16860231-16860349   CU571186,CH242-132I12,10:16826399-16943184
(Clone quality: bE132I12 on chr=10; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000019326 5:85895064-85895170   CU407141,CH242-145D12,5:85876116-85904949
(Clone quality: bE145D12 on chr=5; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018411 1:203326467-203326587   CU606882,CH242-508F6,1:203324237-203331580
(Clone quality: bE508F6 on chr=1; Num_of_Contigs=17; )
5S_rRNA   ENSSSCG00000019339 1:165676576-165676681   CU459053,CH242-153F11,1:165604492-165731324
(Clone quality: bE153F11 on chr=1; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000018367 9:125694523-125694643   CU856114,CH242-415I14,9:125693351-125695512
(Clone quality: bE415I14 on chr=9; Num_of_Contigs=22; )
5S_rRNA   ENSSSCG00000019468 10:52758138-52758242   CU855590,CH242-82O4,10:52674440-52818359
(Clone quality: bE82O4 on chr=10; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000019464 1:133905958-133906075   CU861634,CH242-463N18,1:133885270-133939793
(Clone quality: bE463N18 on chr=1; Num_of_Contigs=7; )
5S_rRNA   ENSSSCG00000018281 7:42326066-42326179 CT737369,CH242-217D23,7:42195308-42367650
(Clone quality: bE217D23 on chr=7; Num_of_Contigs=4; ) 		 
5S_rRNA   ENSSSCG00000019623 16:57733714-57733820   CU571276,CH242-1N19,16:57713485-57750210
(Clone quality: bE1N19 on chr=16; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000018537 4:107241806-107241903   CU469418,CH242-264L10,4:107154030-107294999
(Clone quality: bE264L10 on chr=4; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000019160 1:254393457-254393567   CU606996,CH242-125C18,1:254382935-254394908
(Clone quality: bE125C18 on chr=1; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000018509 7:79508320-79508445   CT826379,CH242-47O3,7:79498658-79689438
(Clone quality: bE47O3 on chr=7; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000019017 14:44026909-44027028   CT827877,CH242-282M5,14:43927031-44041155
(Clone quality: bE282M5 on chr=14; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000019665 4:13473126-13473243   CU469059,CH242-75N15,4:13464275-13477137
(Clone quality: bE75N15 on chr=4; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000019072 5:15722946-15723061   CU914420,CH242-302G7,5:15715050-15727591
(Clone quality: bE302G7 on chr=5; Num_of_Contigs=10; )
5S_rRNA   ENSSSCG00000018189 4:107355866-107355963   FP085489,CH242-167A22,4:107354639-107361650
(Clone quality: bE167A22 on chr=4; Num_of_Contigs=11; )
5S_rRNA   ENSSSCG00000019636 3:91224478-91224597   CU896590,CH242-1M11,3:91219858-91226916
(Clone quality: bE1M11 on chr=3; Num_of_Contigs=19; )
5S_rRNA   ENSSSCG00000019635 7:45876014-45876123 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
5S_rRNA   ENSSSCG00000018199 12:41347692-41347799   CU469262,CH242-13F24,12:41331851-41361647
(Clone quality: bE13F24 on chr=12; Num_of_Contigs=8; )
Go to records:
1-100, 101-200, 201-300, 301-400, 401-500, 501-600, 601-700, 701-800, 801-900, 901-1000, 1001-1100, 1101-1200, 1201-1300, 1301-1400, 1401-1500, 1501-1600, 1601-1700, 1701-1800, 1801-1900, 1901-2000, 2001-2100, 2101-2200, 2201-2300, 2301-2400, 2401-2500, 2501-2600, 2601-2700, 2701-2800, 2801-2900, 2901-3000, 3001-3100, 3101-3200, 3201-3300, 3301-3400, 3401-3500, 3501-3600, 3601-3700, 3701-3800, 3801-3900, 3901-4000, 4001-4100, 4101-4200, 4201-4300, 4301-4400, 4401-4500, 4501-4600, 4601-4700, 4701-4800, 4801-4900, 4901-5000, 5001-5100, 5101-5200, 5201-5300, 5301-5400, 5401-5500, 5501-5600, 5601-5700, 5701-5800, 5801-5900, 5901-6000, 6001-6100, 6101-6200, 6201-6300, 6301-6400, 6401-6500, 6501-6600, 6601-6700, 6701-6800, 6801-6900, 6901-7000, 7001-7100, 7101-7200, 7201-7300, 7301-7400, 7401-7500, 7501-7600, 7601-7700, 7701-7800, 7801-7900, 7901-8000, 8001-8100, 8101-8200, 8201-8300, 8301-8400, 8401-8500, 8501-8600, 8601-8700, 8701-8800, 8801-8900, 8901-9000, 9001-9100, 9101-9200, 9201-9300, 9301-9400, 9401-9500, 9501-9600, 9601-9700, 9701-9800, 9801-9900, 9901-10000, 10001-10100, 10101-10200, 10201-10300, 10301-10400, 10401-10500, 10501-10600, 10601-10700, 10701-10800, 10801-10900, 10901-11000, 11001-11100, 11101-11200, 11201-11300, 11301-11400, 11401-11500, 11501-11600, 11601-11700, 11701-11800, 11801-11900, 11901-12000, 12001-12100, 12101-12200, 12201-12300, 12301-12400, 12401-12500, 12501-12600, 12601-12700, 12701-12800, 12801-12900, 12901-13000, 13001-13100, 13101-13200, 13201-13300, 13301-13400, 13401-13500, 13501-13600, 13601-13700, 13701-13800, 13801-13900, 13901-14000, 14001-14100, 14101-14200, 14201-14300, 14301-14400, 14401-14500, 14501-14600, 14601-14700, 14701-14800, 14801-14900, 14901-15000, 15001-15100, 15101-15200, 15201-15300, 15301-15400, 15401-15500, 15501-15600, 15601-15700, 15701-15800, 15801-15900, 15901-16000, 16001-16100, 16101-16200, 16201-16300, 16301-16400, 16401-16500, 16501-16600, 16601-16700, 16701-16800, 16801-16900, 16901-17000, 17001-17100, 17101-17200, 17201-17300, 17301-17400, 17401-17500, 17501-17600, 17601-17700, 17701-17800, 17801-17900, 17901-18000, 18001-18100, 18101-18200, 18201-18300, 18301-18400, 18401-18500, 18501-18600, 18601-18700, 18701-18800, 18801-18900, 18901-19000, 19001-19100, 19101-19200, 19201-19300, 19301-19400, 19401-19500, 19501-19600, 19601-19700, 19701-19800, 19801-19900, 19901-20000, 20001-20100, 20101-20200, 20201-20300, 20301-20400, 20401-20500, 20501-20600, 20601-20700, 20701-20800, 20801-20900, 20901-21000, 21001-21100, 21101-21200, 21201-21300, 21301-21400, 21401-21500, 21501-21600, 21601-21700, 21701-21800, 21801-21900, 21901-22000, 22001-22100, 22101-22200, 22201-22300, 22301-22400, 22401-22500, 22501-22600, 22601-22700, 22701-22800, 22801-22900, 22901-23000, 23001-23100, 23101-23200, 23201-23300, 23301-23400, 23401-23500, 23501-23600, 23601-23700, 23701-23800, 23801-23900, 23901-24000, 24001-24100, 24101-24200, 24201-24300, 24301-24400, 24401-24500, 24501-24600, 24601-24700, 24701-24800, 24801-24900, 24901-25000, 25001-25100, 25101-25200, 25201-25300, 25301-25400, 25401-25500, 25501-25600, 25601-25700, 25701-25800, 25801-25900, 25901-26000, 26001-26100, 26101-26165

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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