A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
K6-IRS1 ENSSSCG00000000247 5:16449670-16471717    
K6-IRS1 location ⇒ 5:16561832-16561777   CU639398,CH242-183O5,5:16561326-16595368
(Clone quality: bE183O5 on chr=5; Num_of_Contigs=7; )
K6-IRS1 location ⇒ 5:16588534-16588473   CU639398,CH242-183O5,5:16561326-16595368
(Clone quality: bE183O5 on chr=5; Num_of_Contigs=7; )
K6-IRS1 location ⇒ 5:16689190-16689132   CU457755,CH242-177O6,5:16641180-16699329
(Clone quality: bE177O6 on chr=5; Num_of_Contigs=3; )
K6-IRS1 location ⇒ 5:16721813-16721906   CU457755,CH242-177O6,5:16699430-16765044
(Clone quality: bE177O6 on chr=5; Num_of_Contigs=3; )
KAAG1 ENSSSCG00000001086 7:20225134-20225277   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
KAAG1 location ⇒ 7:20217461-20217320   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
KAAG1 location ⇒ 7:20220727-20220671   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
KAAG1 location ⇒ 7:20225473-20224952   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
KAL1 ENSSSCG00000012101 X:4000171-4206020    
KAL1 location ⇒ X:4033583-4033504 CU207413,CH242-507C8,X:3894828-4094962
(Clone quality: bE507C8 on chr=X; Num_of_Contigs=1; ) 		 
KAL1 location ⇒ X:4050491-4050359 CU207413,CH242-507C8,X:3894828-4094962
(Clone quality: bE507C8 on chr=X; Num_of_Contigs=1; ) 		 
KAL1 location ⇒ X:4053837-4053651 CU207413,CH242-507C8,X:3894828-4094962
(Clone quality: bE507C8 on chr=X; Num_of_Contigs=1; ) 		 
KAL1 location ⇒ X:4064652-4064457 CU207413,CH242-507C8,X:3894828-4094962
(Clone quality: bE507C8 on chr=X; Num_of_Contigs=1; ) 		 
KALRN ENSSSCG00000011865 13:102467235-102507110    
KALRN location ⇒ 13:102097654-102097427   CU855847,CH242-86O8,13:102069582-102098542
(Clone quality: bE86O8 on chr=13; Num_of_Contigs=7; )
KALRN location ⇒ 13:102100123-102099884   CU855847,CH242-86O8,13:102098643-102103578
(Clone quality: bE86O8 on chr=13; Num_of_Contigs=7; )
KANK1   ENSSSCG00000005234 1:231131295-231142413    
KANK3   ENSSSCG00000013598 2:51620857-51631330   FP090904,CH242-212F1,2:51608045-51700090
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
KANK4   ENSSSCG00000003821 6:106183840-106211032   CU457462,CH242-167J19,6:106162495-106270096
(Clone quality: bE167J19 on chr=6; Num_of_Contigs=2; )
KARS   ENSSSCG00000002704 6:8707506-8723726   CU856392,CH242-53K23,6:8631869-8811363
(Clone quality: bE53K23 on chr=6; Num_of_Contigs=1; )
KAT2A   ENSSSCG00000017414 12:18370962-18379665   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
KAT5   ENSSSCG00000012980 2:4963300-5117737    
KATNA1   ENSSSCG00000004104 1:17227262-17383831    
KATNAL1   ENSSSCG00000009326 11:6442748-6483521 CU210871,CH242-347O13,11:6437073-6615100
(Clone quality: bE347O13 on chr=11; Num_of_Contigs=6; ) 		 
KATNAL2   ENSSSCG00000005770 1:290553326-290555475   CU928359,CH242-451N13,1:290552874-290612650
(Clone quality: bE451N13 on chr=1; Num_of_Contigs=4; )
KATNB1   ENSSSCG00000002813 6:19890183-19895219   CU467555,CH242-299M23,6:19889770-19895756
(Clone quality: bE299M23 on chr=6; Num_of_Contigs=20; )
KBTBD10   ENSSSCG00000015932 15:71311502-71329392    
KBTBD3   ENSSSCG00000014999 9:35481000-35507594   FP089571,CH242-190H22,9:35459837-35510608
(Clone quality: bE190H22 on chr=9; Num_of_Contigs=1; )
KBTBD4   ENSSSCG00000013227 2:13075737-13081044   CU856103,CH242-271O6,2:12985573-13119992
(Clone quality: bE271O6 on chr=2; Num_of_Contigs=3; )
KBTBD5   ENSSSCG00000011286 13:22073235-22079749   CU928031,CH242-357P22,13:22054047-22118385
(Clone quality: bE357P22 on chr=13; Num_of_Contigs=3; )
KBTBD6   ENSSSCG00000009438 11:24693865-24695952   CU651642,CH242-143O9,11:24691549-24711249
(Clone quality: bE143O9 on chr=11; Num_of_Contigs=5; )
KBTBD7   ENSSSCG00000009437 11:24619554-24621596   CU062515,CH242-111E23,11:24582104-24640471
(Clone quality: bE111E23 on chr=11; Num_of_Contigs=4; )
KBTBD8   ENSSSCG00000011500 13:40469651-40474033   CU633562,CH242-236B18,13:40450817-40474042
(Clone quality: bE236B18 on chr=13; Num_of_Contigs=12; )
KCMF1   ENSSSCG00000008242 3:54434270-54464829    
KCNA1   ENSSSCG00000000716 5:61262277-61263764   CU582813,CH242-426K5,5:61262132-61270002
(Clone quality: bE426K5 on chr=5; Num_of_Contigs=10; )
KCNA3 ENSSSCG00000006802 4:113914483-113915919   CU207230,CH242-384H21,4:113913948-113957841
(Clone quality: bE384H21 on chr=4; Num_of_Contigs=7; )
KCNA3 location ⇒ 14:50986936-50986782   CU468588,CH242-282B12,14:50969832-51085093
(Clone quality: bE282B12 on chr=14; Num_of_Contigs=2; )
KCNA3 location ⇒ 14:50987310-50986997   CU468588,CH242-282B12,14:50969832-51085093
(Clone quality: bE282B12 on chr=14; Num_of_Contigs=2; )
KCNA3 location ⇒ 14:50987490-50987388   CU468588,CH242-282B12,14:50969832-51085093
(Clone quality: bE282B12 on chr=14; Num_of_Contigs=2; )
KCNA4   ENSSSCG00000013330 2:28555233-28557197 CU915386,CH242-197O2,2:28546810-28760288
(Clone quality: bE197O2 on chr=2; Num_of_Contigs=2; ) 		 
KCNA6   ENSSSCG00000000717 5:61369630-61370994   FP102533,CH242-100M9,5:61362999-61435053
(Clone quality: bE100M9 on chr=5; Num_of_Contigs=2; )
KCNAB2   ENSSSCG00000003372 6:45450619-45452701   FP102454,CH242-79J15,6:45448192-45456259
(Clone quality: bE79J15 on chr=6; Num_of_Contigs=7; )
KCNB1   ENSSSCG00000007462 17:53239157-53340928   CU062509,CH242-101F18,17:53191636-53341340
(Clone quality: bE101F18 on chr=17; Num_of_Contigs=3; )
KCNB2   ENSSSCG00000006185 4:65048373-65050983   CU469056,CH242-70H23,4:64988996-65084197
(Clone quality: bE70H23 on chr=4; Num_of_Contigs=4; )
KCNC1   ENSSSCG00000013374 2:38659285-38694204    
KCNC2   ENSSSCG00000000516 5:38261708-38502411    
KCNC4   ENSSSCG00000006810 4:114340383-114359733    
KCND2   ENSSSCG00000016621 18:24754763-24755881   CU929958,CH242-56A17,18:24741465-24756835
(Clone quality: bE56A17 on chr=18; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-1

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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