A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
F10 ENSSSCG00000009558 11:78890042-78914071    
F10 location ⇒ 11:78890262-78890047   FP236214,CH242-266L11,11:78889342-78900407
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
F10 location ⇒ 11:78890987-78890289   FP236214,CH242-266L11,11:78889342-78900407
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
F10 location ⇒ 11:78893722-78893474   FP236214,CH242-266L11,11:78889342-78900407
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
F10 location ⇒ 11:78904651-78904489   FP236214,CH242-266L11,11:78900508-78908600
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
F11 ENSSSCG00000000789 5:68632351-68778165    
F11 ENSSSCG00000006369 4:92956972-92980265    
F11 location ⇒ 15:44210997-44210835   CU466336,CH242-451P14,15:44194186-44219469
(Clone quality: bE451P14 on chr=15; Num_of_Contigs=7; )
F11 location ⇒ 15:44214556-44214391   CU466336,CH242-451P14,15:44194186-44219469
(Clone quality: bE451P14 on chr=15; Num_of_Contigs=7; )
F11 location ⇒ 15:44416904-44417069   CU570964,CH242-96G4,15:44413112-44419278
(Clone quality: bE96G4 on chr=15; Num_of_Contigs=11; )
F11 location ⇒ 15:44419972-44420132   CU570964,CH242-96G4,15:44419379-44426572
(Clone quality: bE96G4 on chr=15; Num_of_Contigs=11; )
F11R ENSSSCG00000006369 4:92956972-92980265    
F11R location ⇒ 4:92957307-92956891   CU137698,CH242-71N12,4:92950464-92962614
(Clone quality: bE71N12 on chr=4; Num_of_Contigs=19; )
F11R location ⇒ 4:92957496-92957446   CU137698,CH242-71N12,4:92950464-92962614
(Clone quality: bE71N12 on chr=4; Num_of_Contigs=19; )
F11R location ⇒ 4:92958132-92958023   CU137698,CH242-71N12,4:92950464-92962614
(Clone quality: bE71N12 on chr=4; Num_of_Contigs=19; )
F13A1 ENSSSCG00000001018 7:3930852-4101357    
F13A1 location ⇒ 7:3930753-3930292   CU469172,CH242-81O15,7:3882429-4039321
(Clone quality: bE81O15 on chr=7; Num_of_Contigs=2; )
F16P1_PIG   ENSSSCG00000010944 10:26696160-26859821    
F2 ENSSSCG00000003764 6:93814979-93858324    
F2 ENSSSCG00000006733 4:107745006-107788523    
F2 ENSSSCG00000000992 7:794133-794582   CU012041,CH242-398E3,7:793961-818650
(Clone quality: bE398E3 on chr=7; Num_of_Contigs=7; )
F2 ENSSSCG00000006735 4:107859868-107904918    
F2 ENSSSCG00000015001 9:35672696-35689703   CU928597,CH242-212P11,9:35657305-35694050
(Clone quality: bE212P11 on chr=9; Num_of_Contigs=11; )
F2 location ⇒ 2:13969555-13969870   FP089504,CH242-497C9,2:13953957-13974033
(Clone quality: bE497C9 on chr=2; Num_of_Contigs=7; )
F2 location ⇒ 2:13990187-13990448   FP089504,CH242-497C9,2:13974134-14018667
(Clone quality: bE497C9 on chr=2; Num_of_Contigs=7; )
F2 location ⇒ 2:14082077-14081816   FP067428,CH242-183B23,2:14049372-14139634
(Clone quality: bE183B23 on chr=2; Num_of_Contigs=2; )
F2 location ⇒ 2:14102431-14102116   FP067428,CH242-183B23,2:14049372-14139634
(Clone quality: bE183B23 on chr=2; Num_of_Contigs=2; )
F2R ENSSSCG00000014090 2:74546901-74560732   CU856323,CH242-163M21,2:74533628-74616944
(Clone quality: bE163M21 on chr=2; Num_of_Contigs=4; )
F2R location ⇒ 2:74546894-74546974   CU856323,CH242-163M21,2:74533628-74616944
(Clone quality: bE163M21 on chr=2; Num_of_Contigs=4; )
F2R location ⇒ 2:74559728-74560796   CU856323,CH242-163M21,2:74533628-74616944
(Clone quality: bE163M21 on chr=2; Num_of_Contigs=4; )
F2RL1 ENSSSCG00000014091 2:74629941-74643580   CU928290,CH242-426G6,2:74625829-74690449
(Clone quality: bE426G6 on chr=2; Num_of_Contigs=2; )
F2RL1 location ⇒ 2:74642559-74643315   CU928290,CH242-426G6,2:74625829-74690449
(Clone quality: bE426G6 on chr=2; Num_of_Contigs=2; )
F2RL2 ENSSSCG00000014089 2:74463670-74469825   CU928525,CH242-310D20,2:74442526-74482404
(Clone quality: bE310D20 on chr=2; Num_of_Contigs=10; )
F2RL2 location ⇒ 2:74463786-74463947   CU928525,CH242-310D20,2:74442526-74482404
(Clone quality: bE310D20 on chr=2; Num_of_Contigs=10; )
F2RL2 location ⇒ 2:74468752-74469497   CU928525,CH242-310D20,2:74442526-74482404
(Clone quality: bE310D20 on chr=2; Num_of_Contigs=10; )
F2RL2 location ⇒ 2:74468752-74469835   CU928525,CH242-310D20,2:74442526-74482404
(Clone quality: bE310D20 on chr=2; Num_of_Contigs=10; )
F2RL3 ENSSSCG00000013868 2:61411767-61412795   CU915550,CH242-256A17,2:61402341-61413350
(Clone quality: bE256A17 on chr=2; Num_of_Contigs=3; )
F3 ENSSSCG00000000789 5:68632351-68778165    
F3 ENSSSCG00000010162 14:57987447-58102038    
F5 ENSSSCG00000015709 15:18357459-18373379   CU570942,CH242-29L23,15:18349132-18373863
(Clone quality: bE29L23 on chr=15; Num_of_Contigs=5; )
F5 ENSSSCG00000006289 4:84491388-84573187 CU179726,CH242-320P15,4:84431793-84627616
(Clone quality: bE320P15 on chr=4; Num_of_Contigs=2; ) 		 
F5 location ⇒ 4:84491388-84491644 CU179726,CH242-320P15,4:84431793-84627616
(Clone quality: bE320P15 on chr=4; Num_of_Contigs=2; ) 		 
F5 location ⇒ 4:84521247-84521471 CU179726,CH242-320P15,4:84431793-84627616
(Clone quality: bE320P15 on chr=4; Num_of_Contigs=2; ) 		 
F5 location ⇒ 4:84545233-84548172 CU179726,CH242-320P15,4:84431793-84627616
(Clone quality: bE320P15 on chr=4; Num_of_Contigs=2; ) 		 
F5 location ⇒ 4:84551213-84551450 CU179726,CH242-320P15,4:84431793-84627616
(Clone quality: bE320P15 on chr=4; Num_of_Contigs=2; ) 		 
F7 location ⇒ 11:78909154-78909017   FP236214,CH242-266L11,11:78908701-78914768
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
F7 location ⇒ 11:78909401-78909286   FP236214,CH242-266L11,11:78908701-78914768
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
F7 location ⇒ 11:78910145-78910005   FP236214,CH242-266L11,11:78908701-78914768
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
F7 location ⇒ 11:78913107-78912944   FP236214,CH242-266L11,11:78908701-78914768
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-22

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team