A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
G0S2 ENSSSCG00000015617 9:125692621-125692932   CU481895,CH242-502F19,9:125685662-125693350
(Clone quality: bE502F19 on chr=9; Num_of_Contigs=35; )
G1P3 location ⇒ 7:123696000-123696119   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
G1P3 location ⇒ 7:123705294-123705175   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
G2 location ⇒ 7:59864238-59864646   CU407101,CH242-73C15,7:59862049-59871158
(Clone quality: bE73C15 on chr=7; Num_of_Contigs=17; )
G2 location ⇒ 7:59868856-59869152   CU407101,CH242-73C15,7:59862049-59871158
(Clone quality: bE73C15 on chr=7; Num_of_Contigs=17; )
G2 location ⇒ 7:59871599-59871820   CU407101,CH242-73C15,7:59871259-59894932
(Clone quality: bE73C15 on chr=7; Num_of_Contigs=17; )
G2 location ⇒ 7:59875264-59875492   CU407101,CH242-73C15,7:59871259-59894932
(Clone quality: bE73C15 on chr=7; Num_of_Contigs=17; )
G22P1 ENSSSCG00000000059 5:3448006-3474054    
G22P1 location ⇒ 5:3448417-3448006   CU633382,CH242-275I12,5:3446251-3461686
(Clone quality: bE275I12 on chr=5; Num_of_Contigs=9; )
G22P1 location ⇒ 5:3463759-3463570   CU633382,CH242-275I12,5:3461787-3468409
(Clone quality: bE275I12 on chr=5; Num_of_Contigs=9; )
G22P1 location ⇒ 5:3466909-3466721   CU633382,CH242-275I12,5:3461787-3468409
(Clone quality: bE275I12 on chr=5; Num_of_Contigs=9; )
G22P1 location ⇒ 5:3467825-3467566   CU633382,CH242-275I12,5:3461787-3468409
(Clone quality: bE275I12 on chr=5; Num_of_Contigs=9; )
G2E3   ENSSSCG00000001974 7:74941346-74991216   CT954260,CH242-199M6,7:74882721-75031038
(Clone quality: bE199M6 on chr=7; Num_of_Contigs=2; )
G6PC2   ENSSSCG00000015925 15:70866337-70873047   FP102141,CH242-244J6,15:70859369-70881627
(Clone quality: bE244J6 on chr=15; Num_of_Contigs=3; )
G6PC3   ENSSSCG00000017365 12:17035625-17039969   CU469063,CH242-86P22,12:17031346-17053980
(Clone quality: bE86P22 on chr=12; Num_of_Contigs=21; )
GAA   ENSSSCG00000017156 12:1315074-1451389    
GAB1 ENSSSCG00000009048 8:72727654-72769812    
GAB1 ENSSSCG00000009048 8:72727654-72769812    
GAB2 ENSSSCG00000014891 9:12607662-12663701    
GAB2 location ⇒ 9:12413740-12413903   FP090886,CH242-508E3,9:12412990-12414992
(Clone quality: bE508E3 on chr=9; Num_of_Contigs=14; )
GAB2 location ⇒ 9:12590727-12590974   FP090886,CH242-508E3,9:12589052-12595927
(Clone quality: bE508E3 on chr=9; Num_of_Contigs=14; )
GAB2 location ⇒ 9:12631833-12632080   CU694636,CH242-522D10,9:12606420-12653192
(Clone quality: bE522D10 on chr=9; Num_of_Contigs=6; )
GAB2 location ⇒ 9:12662428-12662724   CU694636,CH242-522D10,9:12653293-12718701
(Clone quality: bE522D10 on chr=9; Num_of_Contigs=6; )
GAB3 ENSSSCG00000012824 X:123735884-123779735    
GABARAP   ENSSSCG00000017936 12:49756450-49758514   CU681851,CH242-516E15,12:49753145-49759070
(Clone quality: bE516E15 on chr=12; Num_of_Contigs=27; )
GABARAPL2   ENSSSCG00000002707 6:8772267-8783014   CU856392,CH242-53K23,6:8631869-8811363
(Clone quality: bE53K23 on chr=6; Num_of_Contigs=1; )
GABBR1 ENSSSCG00000001242 7:24782402-24919545    
GABBR2   ENSSSCG00000005377 1:251656031-251915759    
GABPB1 location ⇒ 1:126462161-126462523   CU618306,CH242-110E11,1:126436036-126465949
(Clone quality: bE110E11 on chr=1; Num_of_Contigs=16; )
GABPB1 location ⇒ 1:126462547-126463496   CU618306,CH242-110E11,1:126436036-126465949
(Clone quality: bE110E11 on chr=1; Num_of_Contigs=16; )
GABPB1 location ⇒ 1:126713173-126712224   CU571408,CH242-238O3,1:126712057-126779651
(Clone quality: bE238O3 on chr=1; Num_of_Contigs=8; )
GABPB1 location ⇒ 1:126713559-126713197   CU571408,CH242-238O3,1:126712057-126779651
(Clone quality: bE238O3 on chr=1; Num_of_Contigs=8; )
GABRA1   ENSSSCG00000017026 16:59066635-59147979    
GABRA3 location ⇒ X:121666129-121666183 FP017298,CH242-217M1,X:121665273-121734936
(Clone quality: bE217M1 on chr=X; Num_of_Contigs=4; ) 		 
GABRA3 location ⇒ X:121740555-121740722 FP017298,CH242-217M1,X:121735037-121797232
(Clone quality: bE217M1 on chr=X; Num_of_Contigs=4; ) 		 
GABRA3 location ⇒ X:121766081-121766198 FP017298,CH242-217M1,X:121735037-121797232
(Clone quality: bE217M1 on chr=X; Num_of_Contigs=4; ) 		 
GABRA3 location ⇒ X:121793330-121793400 FP017298,CH242-217M1,X:121735037-121797232
(Clone quality: bE217M1 on chr=X; Num_of_Contigs=4; ) 		 
GABRA5   ENSSSCG00000004827 1:148288481-148352563    
GABRA6   ENSSSCG00000017028 16:59465262-59480549   FP016136,CH242-2B13,16:59431987-59508192
(Clone quality: bE2B13 on chr=16; Num_of_Contigs=1; )
GABRB2   ENSSSCG00000017029 16:59600477-59842303    
GABRB3   ENSSSCG00000004828 1:148680723-148698265    
GABRE   ENSSSCG00000012754 X:121477156-121493171   FP074856,CH242-266P11,X:121415771-121520462
(Clone quality: bE266P11 on chr=X; Num_of_Contigs=3; )
GABRG1   ENSSSCG00000008809 8:31094896-31137518   CU856397,CH242-133N12,8:31053963-31138526
(Clone quality: bE133N12 on chr=8; Num_of_Contigs=9; )
GABRG2   ENSSSCG00000017025 16:58848952-58919061   CU929724,CH242-228P12,16:58812948-58940709
(Clone quality: bE228P12 on chr=16; Num_of_Contigs=4; )
GABRQ   ENSSSCG00000012755 X:122008566-122023678 CU468868,CH242-187E18,X:121997200-122069315
(Clone quality: bE187E18 on chr=X; Num_of_Contigs=5; ) 		 
GABRR1   ENSSSCG00000004315 1:59993967-60013507   CU075926,CH242-86H13,1:59921397-60144581
(Clone quality: bE86H13 on chr=1; Num_of_Contigs=1; )
GAD2 ENSSSCG00000011060 10:46547478-46622109    
GAD2 location ⇒ 10:46547683-46547793   CU929835,CH242-56F1,10:46528213-46585609
(Clone quality: bE56F1 on chr=10; Num_of_Contigs=4; )
GAD2 location ⇒ 10:46548489-46548543   CU929835,CH242-56F1,10:46528213-46585609
(Clone quality: bE56F1 on chr=10; Num_of_Contigs=4; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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