A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
L1CAM ENSSSCG00000012787 X:122708635-122721188    
L1CAM location ⇒ X:122713418-122713289   CU915581,CH242-139K22,X:122710754-122729650
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
L1CAM location ⇒ X:122713781-122713621   CU915581,CH242-139K22,X:122710754-122729650
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
L1CAM location ⇒ X:122714057-122713890   CU915581,CH242-139K22,X:122710754-122729650
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
L1CAM location ⇒ X:122714286-122714173   CU915581,CH242-139K22,X:122710754-122729650
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
L2HGDH   ENSSSCG00000005016 1:188395539-188442091   CU222525,CH242-175F12,1:188296962-188466073
(Clone quality: bE175F12 on chr=1; Num_of_Contigs=2; )
L3MBTL   ENSSSCG00000007365 17:48048347-48051649   CU302397,CH242-82F14,17:48044086-48051878
(Clone quality: bE82F14 on chr=17; Num_of_Contigs=13; )
L3MBTL2   ENSSSCG00000000066 5:3637584-3656975   CU407312,CH242-137N12,5:3622530-3679649
(Clone quality: bE137N12 on chr=5; Num_of_Contigs=3; )
L3MBTL3   ENSSSCG00000004203 1:34489506-34586034    
LACE1   ENSSSCG00000004386 1:78009825-78182648    
LACTB   ENSSSCG00000004569 1:112298587-112313089   CU606936,CH242-108A5,1:112286755-112316426
(Clone quality: bE108A5 on chr=1; Num_of_Contigs=6; )
LACTB2   ENSSSCG00000006192 4:66847814-66885669   CU469060,CH242-76J16,4:66813509-66916821
(Clone quality: bE76J16 on chr=4; Num_of_Contigs=2; )
LAC_PIG   ENSSSCG00000010041 14:49745853-49932451    
LAC_PIG   ENSSSCG00000010041 14:49745853-49932451    
LAG3 ENSSSCG00000000688 5:59967002-59972761   CU457492,CH242-370K21,5:59963772-59976892
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
LAG3 location ⇒ 5:59969953-59969677   CU457492,CH242-370K21,5:59963772-59976892
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
LAG3 location ⇒ 5:59970607-59970359   CU457492,CH242-370K21,5:59963772-59976892
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
LAG3 location ⇒ 5:59971507-59971239   CU457492,CH242-370K21,5:59963772-59976892
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
LAG3 location ⇒ 5:59972761-59972376   CU457492,CH242-370K21,5:59963772-59976892
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
LAIR2 location ⇒ 6:40693857-40693559   CU914171,CH242-113P17,6:40685582-40726122
(Clone quality: bE113P17 on chr=6; Num_of_Contigs=7; )
LAIR2 location ⇒ 6:40706251-40706197   CU914171,CH242-113P17,6:40685582-40726122
(Clone quality: bE113P17 on chr=6; Num_of_Contigs=7; )
LAIR2 location ⇒ 6:40775939-40776238 CU179653,PigE-143B24,6:40774451-40794671
(Clone quality: bT143B24 on chr=6; Num_of_Contigs=1; ) 		 
LAIR2 location ⇒ 6:40779914-40779968 CU179653,PigE-143B24,6:40774451-40794671
(Clone quality: bT143B24 on chr=6; Num_of_Contigs=1; ) 		 
LAMA2 ENSSSCG00000004207 1:35190687-35333245    
LAMA2 location ⇒ 1:35050741-35050582   CU914700,CH242-231F10,1:35047624-35061477
(Clone quality: bE231F10 on chr=1; Num_of_Contigs=16; )
LAMA2 location ⇒ 1:35052883-35052693   CU914700,CH242-231F10,1:35047624-35061477
(Clone quality: bE231F10 on chr=1; Num_of_Contigs=16; )
LAMA2 location ⇒ 1:35199223-35199064   CU480638,CH242-45O2,1:35180794-35242874
(Clone quality: bE45O2 on chr=1; Num_of_Contigs=10; )
LAMA2 location ⇒ 1:35201363-35201173   CU480638,CH242-45O2,1:35180794-35242874
(Clone quality: bE45O2 on chr=1; Num_of_Contigs=10; )
LAMA3 ENSSSCG00000003709 6:73905801-74181775    
LAMA3 location ⇒ 6:74173361-74173502   CU993814,CH242-89L18,6:74101529-74213809
(Clone quality: bE89L18 on chr=6; Num_of_Contigs=4; )
LAMA3 location ⇒ 6:74176239-74176400   CU993814,CH242-89L18,6:74101529-74213809
(Clone quality: bE89L18 on chr=6; Num_of_Contigs=4; )
LAMA3 location ⇒ 6:74176530-74176664   CU993814,CH242-89L18,6:74101529-74213809
(Clone quality: bE89L18 on chr=6; Num_of_Contigs=4; )
LAMA3 location ⇒ 6:74178448-74178521   CU993814,CH242-89L18,6:74101529-74213809
(Clone quality: bE89L18 on chr=6; Num_of_Contigs=4; )
LAMA4 ENSSSCG00000004425 1:81712614-81865082   CU302401,CH242-264N18,1:81686807-81867620
(Clone quality: bE264N18 on chr=1; Num_of_Contigs=1; )
LAMA4 location ⇒ 1:81716904-81716789   CU302401,CH242-264N18,1:81686807-81867620
(Clone quality: bE264N18 on chr=1; Num_of_Contigs=1; )
LAMA4 location ⇒ 1:81719232-81719098   CU302401,CH242-264N18,1:81686807-81867620
(Clone quality: bE264N18 on chr=1; Num_of_Contigs=1; )
LAMA4 location ⇒ 1:81721376-81721214   CU302401,CH242-264N18,1:81686807-81867620
(Clone quality: bE264N18 on chr=1; Num_of_Contigs=1; )
LAMA4 location ⇒ 1:81722756-81722601   CU302401,CH242-264N18,1:81686807-81867620
(Clone quality: bE264N18 on chr=1; Num_of_Contigs=1; )
LAMB1 ENSSSCG00000015444 9:100539893-100598385    
LAMB1 location ⇒ 9:100552275-100552669   CU929844,CH242-62F24,9:100537558-100570229
(Clone quality: bE62F24 on chr=9; Num_of_Contigs=6; )
LAMB1 location ⇒ 9:100556412-100557440   CU929844,CH242-62F24,9:100537558-100570229
(Clone quality: bE62F24 on chr=9; Num_of_Contigs=6; )
LAMB2 ENSSSCG00000015555 9:116580488-116700320    
LAMB2 ENSSSCG00000011377 13:26742855-26753998    
LAMB2 location ⇒ 13:26745195-26745099   CU856115,CH242-45E6,13:26742796-26748395
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
LAMB2 location ⇒ 13:26745530-26745309   CU856115,CH242-45E6,13:26742796-26748395
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
LAMB2 location ⇒ 13:26745844-26745617   CU856115,CH242-45E6,13:26742796-26748395
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
LAMB2 location ⇒ 13:26746088-26745922   CU856115,CH242-45E6,13:26742796-26748395
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
LAMB3 ENSSSCG00000015618 9:125751523-125851038    
LAMB3 location ⇒ 9:125848464-125848302   CU856114,CH242-415I14,9:125842463-125851158
(Clone quality: bE415I14 on chr=9; Num_of_Contigs=22; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team