A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LOC100154567 location ⇒ 1:830616-830705   CU914405,CH242-180N18,1:823905-840864
(Clone quality: bE180N18 on chr=1; Num_of_Contigs=5; )
LOC100154567 location ⇒ 1:930169-930262   CU633721,CH242-504P16,1:840865-950063
(Clone quality: bE504P16 on chr=1; Num_of_Contigs=3; )
LOC100154598 ENSSSCG00000012604 X:95827889-95864680    
LOC100154598 location ⇒ X:129642-129573   FP236683,PigE-184L6,X:113341-161302
(Clone quality: bT184L6 on chr=X; Num_of_Contigs=8; )
LOC100154598 location ⇒ X:1688747-1688820 FP102438,CH242-227G12,X:1614901-1722511
(Clone quality: bE227G12 on chr=X; Num_of_Contigs=2; ) 		 
LOC100154598 location ⇒ X:614024-614109 FP102150,CH242-214I15,X:553109-664622
(Clone quality: bE214I15 on chr=X; Num_of_Contigs=1; ) 		 
LOC100154598 location ⇒ X:731239-731324   FP015888,CH242-160L10,X:664623-820306
(Clone quality: bE160L10 on chr=X; Num_of_Contigs=1; )
LOC100157183 ENSSSCG00000010551 14:116259893-116266316    
LOC100157183 location ⇒ 14:23916321-23916256   CT990640,CH242-238O14,14:23867353-24001753
(Clone quality: bE238O14 on chr=14; Num_of_Contigs=2; )
LOC100157183 location ⇒ 14:51515919-51515984   CU468899,CH242-236E21,14:51456577-51553624
(Clone quality: bE236E21 on chr=14; Num_of_Contigs=7; )
LOC100157183 location ⇒ 14:71604782-71604891 CT737213,CH242-10P9,14:71522928-71640456
(Clone quality: bE10P9 on chr=14; Num_of_Contigs=3; ) 		 
LOC100157183 location ⇒ 14:78015377-78015462   CU468981,CH242-208A14,14:77967541-78016433
(Clone quality: bE208A14 on chr=14; Num_of_Contigs=3; )
LOC100157270 ENSSSCG00000002008 7:81512763-81521299   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
LOC100157270 location ⇒ 7:1292055-1291954   CT961043,CH242-1G12,7:1238638-1331816
(Clone quality: bE1G12 on chr=7; Num_of_Contigs=4; )
LOC100157270 location ⇒ 7:1528725-1528810   CU469137,CH242-231B12,7:1521301-1568879
(Clone quality: bE231B12 on chr=7; Num_of_Contigs=12; )
LOC100157270 location ⇒ 7:2322919-2322818   CU607065,CH242-35C2,7:2318547-2323352
(Clone quality: bE35C2 on chr=7; Num_of_Contigs=17; )
LOC100157270 location ⇒ 7:2367994-2367893   CU607065,CH242-35C2,7:2347388-2372804
(Clone quality: bE35C2 on chr=7; Num_of_Contigs=17; )
LOC100158168 location ⇒ 11:2092342-2092221   FP236535,CH242-504P8,11:2070896-2101639
(Clone quality: bE504P8 on chr=11; Num_of_Contigs=13; )
LOC100158168 location ⇒ 11:3312011-3312125   CU856270,CH242-441I10,11:3296588-3313583
(Clone quality: bE441I10 on chr=11; Num_of_Contigs=13; )
LOC100158168 location ⇒ 11:6662544-6662625 CU062617,CH242-96H3,11:6637457-6779643
(Clone quality: bE96H3 on chr=11; Num_of_Contigs=1; ) 		 
LOC100158168 location ⇒ 11:838572-838448   CU329693,CH242-256M20,11:807771-850683
(Clone quality: bE256M20 on chr=11; Num_of_Contigs=3; )
LOC126147 location ⇒ 6:37704575-37703968   CU929759,CH242-294C24,6:37595303-37722216
(Clone quality: bE294C24 on chr=6; Num_of_Contigs=3; )
LOC158376 location ⇒ 1:247820970-247821202   FP236212,CH242-262G18,1:247814608-247822869
(Clone quality: bE262G18 on chr=1; Num_of_Contigs=8; )
LOC158376 location ⇒ 1:247822138-247822215   FP236212,CH242-262G18,1:247814608-247822869
(Clone quality: bE262G18 on chr=1; Num_of_Contigs=8; )
LOC158376 location ⇒ 1:247981934-247981702   CU861527,CH242-179J7,1:247980550-247984343
(Clone quality: bE179J7 on chr=1; Num_of_Contigs=10; )
LOC392395 location ⇒ 9:119535796-119535642   CU915512,CH242-502G24,9:119529079-119538319
(Clone quality: bE502G24 on chr=9; Num_of_Contigs=7; )
LOC392395 location ⇒ 9:119539879-119539734   CU915512,CH242-502G24,9:119538420-119545395
(Clone quality: bE502G24 on chr=9; Num_of_Contigs=7; )
LOC392395 location ⇒ 9:119542780-119542605   CU915512,CH242-502G24,9:119538420-119545395
(Clone quality: bE502G24 on chr=9; Num_of_Contigs=7; )
LOC392395 location ⇒ 9:119547193-119547023   CU915512,CH242-502G24,9:119545496-119547815
(Clone quality: bE502G24 on chr=9; Num_of_Contigs=7; )
LOC534839 location ⇒ 7:103465484-103465920   CT954261,CH242-236O9,7:103281956-103494338
(Clone quality: bE236O9 on chr=7; Num_of_Contigs=1; )
LOC534839 location ⇒ 7:103488723-103488968   CT954261,CH242-236O9,7:103281956-103494338
(Clone quality: bE236O9 on chr=7; Num_of_Contigs=1; )
LOC534839 location ⇒ 7:103506327-103506407 CT737309,CH242-100L1,7:103494339-103677306
(Clone quality: bE100L1 on chr=7; Num_of_Contigs=1; ) 		 
LOC534839 location ⇒ 7:103507761-103508086 CT737309,CH242-100L1,7:103494339-103677306
(Clone quality: bE100L1 on chr=7; Num_of_Contigs=1; ) 		 
LOC57228 location ⇒ 5:15200624-15200703   CU694522,CH242-54E2,5:15197540-15201705
(Clone quality: bE54E2 on chr=5; Num_of_Contigs=10; )
LOC57228 location ⇒ 5:15201806-15202164    
LOC57228 location ⇒ 5:15401039-15401118   CU694837,CH242-191H6,5:15374884-15408249
(Clone quality: bE191H6 on chr=5; Num_of_Contigs=5; )
LOC57228 location ⇒ 5:15402414-15402806   CU694837,CH242-191H6,5:15374884-15408249
(Clone quality: bE191H6 on chr=5; Num_of_Contigs=5; )
LOC595130 location ⇒ 14:10410134-10410227   CT956017,CH242-305F22,14:10379802-10562482
(Clone quality: bE305F22 on chr=14; Num_of_Contigs=1; )
LOC595130 location ⇒ 14:17200876-17200748   CU407014,CH242-117L23,14:17065514-17231233
(Clone quality: bE117L23 on chr=14; Num_of_Contigs=2; )
LOC595130 location ⇒ 14:35868124-35868055   CU424482,CH242-136B9,14:35742588-35915478
(Clone quality: bE136B9 on chr=14; Num_of_Contigs=3; )
LOC595130 location ⇒ 14:464182-464078   FP102705,CH242-43I16,14:458861-471799
(Clone quality: bE43I16 on chr=14; Num_of_Contigs=15; )
LOC613546 location ⇒ 6:30873349-30873472   CU695137,CH242-64I22,6:30867782-30895849
(Clone quality: bE64I22 on chr=6; Num_of_Contigs=6; )
LOC613546 location ⇒ 6:31182255-31182168   CU929594,CH242-228C18,6:31122667-31265021
(Clone quality: bE228C18 on chr=6; Num_of_Contigs=3; )
LOC613546 location ⇒ 6:32081535-32081596   CU694701,CH242-276E15,6:32066842-32093230
(Clone quality: bE276E15 on chr=6; Num_of_Contigs=4; )
LOC613546 location ⇒ 6:42482798-42482864   FP236147,CH242-367C11,6:42472481-42497699
(Clone quality: bE367C11 on chr=6; Num_of_Contigs=2; )
LOC643037 location ⇒ 9:26993288-26993392   FP236710,CH242-260H20,9:26958266-26994295
(Clone quality: bE260H20 on chr=9; Num_of_Contigs=2; )
LOC643037 location ⇒ 9:27003598-27003727   FP236710,CH242-260H20,9:26999281-27022484
(Clone quality: bE260H20 on chr=9; Num_of_Contigs=2; )
LOC654323 location ⇒ 17:35630007-35630315   CU638675,CH242-204E6,17:35560423-35742963
(Clone quality: bE204E6 on chr=17; Num_of_Contigs=1; )
LOC654323 location ⇒ 17:35630692-35631093   CU638675,CH242-204E6,17:35560423-35742963
(Clone quality: bE204E6 on chr=17; Num_of_Contigs=1; )
LOC654323 location ⇒ 17:35826424-35826732   FP236274,CH242-464F3,17:35815183-35832078
(Clone quality: bE464F3 on chr=17; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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