A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
DOCK2 location ⇒ 16:51130490-51130369   CU694271,CH242-177C11,16:51113425-51158278
(Clone quality: bE177C11 on chr=16; Num_of_Contigs=10; )
DOCK2 location ⇒ 16:51131212-51131120   CU694271,CH242-177C11,16:51113425-51158278
(Clone quality: bE177C11 on chr=16; Num_of_Contigs=10; )
DOCK2 location ⇒ 16:51138301-51138145   CU694271,CH242-177C11,16:51113425-51158278
(Clone quality: bE177C11 on chr=16; Num_of_Contigs=10; )
DOCK2 location ⇒ 16:51152935-51152823   CU694271,CH242-177C11,16:51113425-51158278
(Clone quality: bE177C11 on chr=16; Num_of_Contigs=10; )
DOCK3 ENSSSCG00000011416 13:28225253-28366912    
DOCK3 location ⇒ 13:28269159-28269033   CU914181,CH242-193J1,13:28175235-28307117
(Clone quality: bE193J1 on chr=13; Num_of_Contigs=2; )
DOCK3 location ⇒ 13:28271559-28271395   CU914181,CH242-193J1,13:28175235-28307117
(Clone quality: bE193J1 on chr=13; Num_of_Contigs=2; )
DOCK3 location ⇒ 13:28272188-28272082   CU914181,CH242-193J1,13:28175235-28307117
(Clone quality: bE193J1 on chr=13; Num_of_Contigs=2; )
DOCK3 location ⇒ 13:28272909-28272763   CU914181,CH242-193J1,13:28175235-28307117
(Clone quality: bE193J1 on chr=13; Num_of_Contigs=2; )
DOCK4   ENSSSCG00000016648 18:32597182-32805270    
DOCK5 ENSSSCG00000009650 14:9411302-9551868    
DOCK5 location ⇒ 14:9533641-9533735   CU639434,CH242-499F19,14:9462258-9539757
(Clone quality: bE499F19 on chr=14; Num_of_Contigs=9; )
DOCK5 location ⇒ 14:9536960-9537129   CU639434,CH242-499F19,14:9462258-9539757
(Clone quality: bE499F19 on chr=14; Num_of_Contigs=9; )
DOCK5 location ⇒ 14:9548954-9549129   CU639434,CH242-499F19,14:9539858-9550306
(Clone quality: bE499F19 on chr=14; Num_of_Contigs=9; )
DOCK5 location ⇒ 14:9549815-9549952   CU639434,CH242-499F19,14:9539858-9550306
(Clone quality: bE499F19 on chr=14; Num_of_Contigs=9; )
DOCK7 ENSSSCG00000003818 6:105826906-106096402    
DOCK7 location ⇒ 6:106081211-106081411   FP067351,CH242-80C11,6:106051433-106124076
(Clone quality: bE80C11 on chr=6; Num_of_Contigs=4; )
DOCK7 location ⇒ 6:106081763-106081909   FP067351,CH242-80C11,6:106051433-106124076
(Clone quality: bE80C11 on chr=6; Num_of_Contigs=4; )
DOCK7 location ⇒ 6:106084367-106084478   FP067351,CH242-80C11,6:106051433-106124076
(Clone quality: bE80C11 on chr=6; Num_of_Contigs=4; )
DOCK7 location ⇒ 6:106090802-106090893   FP067351,CH242-80C11,6:106051433-106124076
(Clone quality: bE80C11 on chr=6; Num_of_Contigs=4; )
DOCK8   ENSSSCG00000005240 1:231571899-231753019    
DOCK9   ENSSSCG00000009514 11:68767649-68825864    
DOHH   ENSSSCG00000013478 2:47919745-47924738   FP016022,CH242-272P3,2:47913965-47942526
(Clone quality: bE272P3 on chr=2; Num_of_Contigs=9; )
DOK1 ENSSSCG00000008265 3:62885275-62887990    
DOK1 location ⇒ 3:62886499-62885776   CU633183,CH242-294E8,3:62882989-62887795
(Clone quality: bE294E8 on chr=3; Num_of_Contigs=14; )
DOK1 location ⇒ 3:62886896-62886737   CU633183,CH242-294E8,3:62882989-62887795
(Clone quality: bE294E8 on chr=3; Num_of_Contigs=14; )
DOK2 ENSSSCG00000009612 14:6282245-6286053   CT737273,CH242-75B21,14:6274966-6289143
(Clone quality: bE75B21 on chr=14; Num_of_Contigs=4; )
DOK2 location ⇒ 14:6084314-6085455   CU657955,CH242-512M9,14:6083570-6086617
(Clone quality: bE512M9 on chr=14; Num_of_Contigs=23; )
DOK2 location ⇒ 14:6283294-6283578   CT737273,CH242-75B21,14:6274966-6289143
(Clone quality: bE75B21 on chr=14; Num_of_Contigs=4; )
DOK2 location ⇒ 14:6284742-6284931   CT737273,CH242-75B21,14:6274966-6289143
(Clone quality: bE75B21 on chr=14; Num_of_Contigs=4; )
DOK2 location ⇒ 14:6285434-6286575   CT737273,CH242-75B21,14:6274966-6289143
(Clone quality: bE75B21 on chr=14; Num_of_Contigs=4; )
DOK5   ENSSSCG00000007488 17:57925594-58077120    
DOK7   ENSSSCG00000008702 8:1555101-1567527    
DOLK   ENSSSCG00000005666 1:283931874-283933490 CU076102,CH242-68C14,1:283855073-284074390
(Clone quality: bE68C14 on chr=1; Num_of_Contigs=6; ) 		 
DOLPP1   ENSSSCG00000005670 1:284049111-284056934 CU076102,CH242-68C14,1:283855073-284074390
(Clone quality: bE68C14 on chr=1; Num_of_Contigs=6; ) 		 
DOM3Z ENSSSCG00000001425 7:27879699-27882134 CT956038,CH242-183N12,7:27767223-27953076
(Clone quality: bE183N12 on chr=7; Num_of_Contigs=3; ) 		 
DOPEY1   ENSSSCG00000004457 1:87241194-87324760    
DOPEY2   ENSSSCG00000012054 13:140285206-140412378    
DOT1L   ENSSSCG00000013457 2:47070433-47082978    
DPAGT1   ENSSSCG00000015110 9:44889920-44895712   CU695209,CH242-241K21,9:44888038-44896514
(Clone quality: bE241K21 on chr=9; Num_of_Contigs=5; )
DPCD   ENSSSCG00000010565 14:117481044-117501046   CT737224,CH242-8E16,14:117416776-117558707
(Clone quality: bE8E16 on chr=14; Num_of_Contigs=1; )
DPCR1 ENSSSCG00000001386 7:27386795-27396715    
DPF2 ENSSSCG00000012995 2:5273023-5288569    
DPF2 location ⇒ 2:5272661-5272294   CU856029,CH242-276E8,2:5261731-5284684
(Clone quality: bE276E8 on chr=2; Num_of_Contigs=9; )
DPF2 location ⇒ 2:5273514-5272710   CU856029,CH242-276E8,2:5261731-5284684
(Clone quality: bE276E8 on chr=2; Num_of_Contigs=9; )
DPF2 location ⇒ 2:5276578-5276496   CU856029,CH242-276E8,2:5261731-5284684
(Clone quality: bE276E8 on chr=2; Num_of_Contigs=9; )
DPF2 location ⇒ 2:5277977-5277861   CU856029,CH242-276E8,2:5261731-5284684
(Clone quality: bE276E8 on chr=2; Num_of_Contigs=9; )
DPF3   ENSSSCG00000002333 7:103926340-104086461    
DPH1   ENSSSCG00000017824 12:45583274-45594768   CU914290,CH242-53A19,12:45568966-45602639
(Clone quality: bE53A19 on chr=12; Num_of_Contigs=6; )
DPH3   ENSSSCG00000011196 13:2817468-2819946   CU466353,CH242-456O2,13:2815927-2874609
(Clone quality: bE456O2 on chr=13; Num_of_Contigs=4; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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