A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IL1B location ⇒ 3:38885918-38885726   FP015825,CH242-467E19,3:38884460-38887831
(Clone quality: bE467E19 on chr=3; Num_of_Contigs=27; )
IL1B location ⇒ 3:38885927-38885371   FP015825,CH242-467E19,3:38884460-38887831
(Clone quality: bE467E19 on chr=3; Num_of_Contigs=27; )
IL1B location ⇒ 3:38956242-38956052   CU855588,CH242-108K8,3:38948020-39033622
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1B location ⇒ 3:38956253-38955695   CU855588,CH242-108K8,3:38948020-39033622
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1F5 location ⇒ 11:54357566-54357503   CT963120,CH242-10B20,11:54303082-54466111
(Clone quality: bE10B20 on chr=11; Num_of_Contigs=1; )
IL1F7 location ⇒ 3:177376-177267   FP102523,CH242-174H19,3:176551-207230
(Clone quality: bE174H19 on chr=3; Num_of_Contigs=7; )
IL1F7 location ⇒ 3:177376-177267   FP102523,CH242-174H19,3:176551-207230
(Clone quality: bE174H19 on chr=3; Num_of_Contigs=7; )
IL1F7 location ⇒ 3:85708-85781   FP102618,CH242-1B21,3:75830-115065
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
IL1F7 location ⇒ 3:85841-85776   FP102618,CH242-1B21,3:75830-115065
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
IL1R1 ENSSSCG00000008162 3:47896450-47909993   CU856003,CH242-200C14,3:47889549-47912820
(Clone quality: bE200C14 on chr=3; Num_of_Contigs=5; )
IL1R2 ENSSSCG00000008163 3:48048433-48111836    
IL1R2 location ⇒ 3:48018178-48018487   CU856003,CH242-200C14,3:47919317-48022919
(Clone quality: bE200C14 on chr=3; Num_of_Contigs=5; )
IL1R2 location ⇒ 3:48020969-48021111   CU856003,CH242-200C14,3:47919317-48022919
(Clone quality: bE200C14 on chr=3; Num_of_Contigs=5; )
IL1R2 location ⇒ 3:48022931-48023068   CU862006,CH242-65L22,3:48022920-48023761
(Clone quality: bE65L22 on chr=3; Num_of_Contigs=8; )
IL1R2 location ⇒ 3:48111835-48111777   CU862006,CH242-65L22,3:48107184-48112565
(Clone quality: bE65L22 on chr=3; Num_of_Contigs=8; )
IL1RAPL1 ENSSSCG00000012196 X:25137259-25205163    
IL1RAPL1 location ⇒ X:25205789-25205985   CU464142,CH242-14P14,X:25175504-25231311
(Clone quality: bE14P14 on chr=X; Num_of_Contigs=4; )
IL1RAPL2 ENSSSCG00000012545 X:84381760-84449091    
IL1RAPL2 location ⇒ X:84448882-84448399   CU467668,CH242-13A16,X:84437788-84520794
(Clone quality: bE13A16 on chr=X; Num_of_Contigs=3; )
IL1RL1 ENSSSCG00000008159 3:47594795-47621810   CU929680,CH242-116J7,3:47581746-47629919
(Clone quality: bE116J7 on chr=3; Num_of_Contigs=4; )
IL1RL1 location ⇒ 3:47598814-47598726   CU929680,CH242-116J7,3:47581746-47629919
(Clone quality: bE116J7 on chr=3; Num_of_Contigs=4; )
IL1RL1 location ⇒ 3:47599956-47599861   CU929680,CH242-116J7,3:47581746-47629919
(Clone quality: bE116J7 on chr=3; Num_of_Contigs=4; )
IL1RL1LG ENSSSCG00000013631 2:52700561-52703092   CU928849,CH242-1G23,2:52653544-52705251
(Clone quality: bE1G23 on chr=2; Num_of_Contigs=8; )
IL1RL1LG location ⇒ 2:52701070-52700721   CU928849,CH242-1G23,2:52653544-52705251
(Clone quality: bE1G23 on chr=2; Num_of_Contigs=8; )
IL1RL1LG location ⇒ 2:52701863-52701679   CU928849,CH242-1G23,2:52653544-52705251
(Clone quality: bE1G23 on chr=2; Num_of_Contigs=8; )
IL1RL1LG location ⇒ 2:52702108-52702006   CU928849,CH242-1G23,2:52653544-52705251
(Clone quality: bE1G23 on chr=2; Num_of_Contigs=8; )
IL1RL1LG location ⇒ 2:52702979-52702793   CU928849,CH242-1G23,2:52653544-52705251
(Clone quality: bE1G23 on chr=2; Num_of_Contigs=8; )
IL1RL2 ENSSSCG00000008160 3:47646110-47670156   CU929680,CH242-116J7,3:47645559-47673106
(Clone quality: bE116J7 on chr=3; Num_of_Contigs=4; )
IL1RL2 location ⇒ 3:47653965-47654089   CU929680,CH242-116J7,3:47645559-47673106
(Clone quality: bE116J7 on chr=3; Num_of_Contigs=4; )
IL1RL2 location ⇒ 3:47689617-47689741   FP102590,CH242-169D3,3:47678107-47690473
(Clone quality: bE169D3 on chr=3; Num_of_Contigs=5; )
IL2 ENSSSCG00000011025 10:40357121-40554534    
IL2 ENSSSCG00000009088 8:87117250-87121962   CU861495,CH242-8E23,8:87041129-87162511
(Clone quality: bE8E23 on chr=8; Num_of_Contigs=3; )
IL2 location ⇒ 8:87117250-87117396   CU861495,CH242-8E23,8:87041129-87162511
(Clone quality: bE8E23 on chr=8; Num_of_Contigs=3; )
IL2 location ⇒ 8:87117485-87117547   CU861495,CH242-8E23,8:87041129-87162511
(Clone quality: bE8E23 on chr=8; Num_of_Contigs=3; )
IL2 location ⇒ 8:87119784-87119933   CU861495,CH242-8E23,8:87041129-87162511
(Clone quality: bE8E23 on chr=8; Num_of_Contigs=3; )
IL2 location ⇒ 8:87121742-87121892   CU861495,CH242-8E23,8:87041129-87162511
(Clone quality: bE8E23 on chr=8; Num_of_Contigs=3; )
IL20 ENSSSCG00000015654 9:132042193-132044949   CU655936,CH242-369P7,9:132005606-132069989
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL20 location ⇒ 9:132042799-132042922   CU655936,CH242-369P7,9:132005606-132069989
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL20RA ENSSSCG00000004157 1:28522634-28553245    
IL20RA location ⇒ 1:28666434-28667211   CU633940,CH242-211F12,1:28665392-28671977
(Clone quality: bE211F12 on chr=1; Num_of_Contigs=6; )
IL20RB ENSSSCG00000011654 13:63938123-63938227   CU606966,CH242-399P7,13:63937564-63942139
(Clone quality: bE399P7 on chr=13; Num_of_Contigs=24; )
IL21 ENSSSCG00000009087 8:87010075-87018057   CU915467,CH242-239F8,8:87009682-87024087
(Clone quality: bE239F8 on chr=8; Num_of_Contigs=10; )
IL21 location ⇒ 8:87010093-87010243   CU915467,CH242-239F8,8:87009682-87024087
(Clone quality: bE239F8 on chr=8; Num_of_Contigs=10; )
IL21 location ⇒ 8:87014752-87014910   CU915467,CH242-239F8,8:87009682-87024087
(Clone quality: bE239F8 on chr=8; Num_of_Contigs=10; )
IL21 location ⇒ 8:87017860-87017937   CU915467,CH242-239F8,8:87009682-87024087
(Clone quality: bE239F8 on chr=8; Num_of_Contigs=10; )
IL21R ENSSSCG00000007816 3:17596810-17636648   CU571202,CH242-198E22,3:17518909-17637743
(Clone quality: bE198E22 on chr=3; Num_of_Contigs=2; )
IL21R location ⇒ 3:17597567-17596089   CU571202,CH242-198E22,3:17518909-17637743
(Clone quality: bE198E22 on chr=3; Num_of_Contigs=2; )
IL21R location ⇒ 3:17601539-17601359   CU571202,CH242-198E22,3:17518909-17637743
(Clone quality: bE198E22 on chr=3; Num_of_Contigs=2; )
IL21R location ⇒ 3:17606705-17606505   CU571202,CH242-198E22,3:17518909-17637743
(Clone quality: bE198E22 on chr=3; Num_of_Contigs=2; )
IL21R location ⇒ 3:17636647-17636497   CU571202,CH242-198E22,3:17518909-17637743
(Clone quality: bE198E22 on chr=3; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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