A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
GPR153   ENSSSCG00000003371 6:45439541-45460707    
GPR155   ENSSSCG00000015965 15:75262630-75403239    
GPR156   ENSSSCG00000011888 13:104725467-104789904    
GPR158   ENSSSCG00000011058 10:46146705-46274725    
GPR161   ENSSSCG00000006302 4:86167922-86191199   CU468151,CH242-288C1,4:86135390-86205796
(Clone quality: bE288C1 on chr=4; Num_of_Contigs=11; )
GPR162   ENSSSCG00000000681 5:59866881-59879908    
GPR17 ENSSSCG00000015863 15:55821841-55822860   CU855997,CH242-197O1,15:55804959-55849755
(Clone quality: bE197O1 on chr=15; Num_of_Contigs=4; )
GPR17 location ⇒ 15:55822586-55822061   CU855997,CH242-197O1,15:55804959-55849755
(Clone quality: bE197O1 on chr=15; Num_of_Contigs=4; )
GPR174   ENSSSCG00000012447 X:62969601-62970602   CU633239,CH242-202B2,X:62873967-62973451
(Clone quality: bE202B2 on chr=X; Num_of_Contigs=5; )
GPR175   ENSSSCG00000011623 13:60067911-60078792   CU928432,CH242-143L21,13:60046148-60086220
(Clone quality: bE143L21 on chr=13; Num_of_Contigs=4; )
GPR176   ENSSSCG00000004787 1:137884558-137891824   CU606977,CH242-267G12,1:137834756-137901565
(Clone quality: bE267G12 on chr=1; Num_of_Contigs=9; )
GPR177   ENSSSCG00000003795 6:101884549-101990156    
GPR18   ENSSSCG00000009515 11:69025253-69026248   FP236264,CH242-238G14,11:69016193-69041860
(Clone quality: bE238G14 on chr=11; Num_of_Contigs=8; )
GPR180   ENSSSCG00000009492 11:64235624-64267288   CU986273,CH242-12L1,11:64235553-64285794
(Clone quality: bE12L1 on chr=11; Num_of_Contigs=7; )
GPR182   ENSSSCG00000000416 5:21322701-21323792   FP236389,CH242-191L18,5:21313775-21350609
(Clone quality: bE191L18 on chr=5; Num_of_Contigs=7; )
GPR183 ENSSSCG00000009517 11:69203947-69204909   CU972472,CH242-117F14,11:69198433-69208363
(Clone quality: bE117F14 on chr=11; Num_of_Contigs=6; )
GPR21   ENSSSCG00000005581 1:278534385-278535434   CU062513,CH242-108E14,1:278523736-278541474
(Clone quality: bE108E14 on chr=1; Num_of_Contigs=11; )
GPR22   ENSSSCG00000015442 9:100406106-100407407   CU972464,CH242-137G11,9:100401685-100424777
(Clone quality: bE137G11 on chr=9; Num_of_Contigs=14; )
GPR26   ENSSSCG00000010727 14:139681386-139700467   CT737317,CH242-165M15,14:139588325-139753803
(Clone quality: bE165M15 on chr=14; Num_of_Contigs=1; )
GPR3   ENSSSCG00000003576 6:58280708-58281700   CU466983,CH242-5M3,6:58217448-58296419
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
GPR30 location ⇒ 3:477156-477957   CU928407,CH242-230H6,3:475053-525379
(Clone quality: bE230H6 on chr=3; Num_of_Contigs=8; )
GPR37   ENSSSCG00000016599 18:21126109-21141484   CU972394,CH242-199M5,18:21124475-21148312
(Clone quality: bE199M5 on chr=18; Num_of_Contigs=6; )
GPR39   ENSSSCG00000015707 15:17958576-18171310    
GPR44 ENSSSCG00000013106 2:9254314-9255531   CU861565,CH242-480L10,2:9238313-9266378
(Clone quality: bE480L10 on chr=2; Num_of_Contigs=15; )
GPR44 location ⇒ 2:9255102-9254859   CU861565,CH242-480L10,2:9238313-9266378
(Clone quality: bE480L10 on chr=2; Num_of_Contigs=15; )
GPR44 location ⇒ 2:9255542-9254999   CU861565,CH242-480L10,2:9238313-9266378
(Clone quality: bE480L10 on chr=2; Num_of_Contigs=15; )
GPR44 location ⇒ 2:9257769-9257691   CU861565,CH242-480L10,2:9238313-9266378
(Clone quality: bE480L10 on chr=2; Num_of_Contigs=15; )
GPR52   ENSSSCG00000015501 9:109571731-109572816   CU595472,CH242-250C9,9:109562184-109576215
(Clone quality: bE250C9 on chr=9; Num_of_Contigs=22; )
GPR55   ENSSSCG00000016268 15:124084578-124085540   CU571100,CH242-126N17,15:123990604-124093801
(Clone quality: bE126N17 on chr=15; Num_of_Contigs=2; )
GPR56 ENSSSCG00000002815 6:19939841-19960666    
GPR56 location ⇒ 6:19938633-19937897   CU467555,CH242-299M23,6:19934264-19938776
(Clone quality: bE299M23 on chr=6; Num_of_Contigs=20; )
GPR56 location ⇒ 6:19940111-19939842   CU467555,CH242-299M23,6:19938877-19943750
(Clone quality: bE299M23 on chr=6; Num_of_Contigs=20; )
GPR6   ENSSSCG00000004406 1:80142392-80143492   FP102331,CH242-350C23,1:80134533-80161782
(Clone quality: bE350C23 on chr=1; Num_of_Contigs=4; )
GPR61   ENSSSCG00000006825 4:115099543-115100898   CU633714,CH242-413N19,4:115062764-115147480
(Clone quality: bE413N19 on chr=4; Num_of_Contigs=4; )
GPR63   ENSSSCG00000004341 1:67176148-67177407   CU302439,CH242-358L18,1:67105072-67301146
(Clone quality: bE358L18 on chr=1; Num_of_Contigs=1; )
GPR64   ENSSSCG00000012158 X:14804798-14984859    
GPR65 ENSSSCG00000002421 7:117749543-117750475 CT842122,CH242-168H13,7:117549287-117771476
(Clone quality: bE168H13 on chr=7; Num_of_Contigs=3; )
 
GPR68 ENSSSCG00000002439 7:120750023-120751108 CT737342,CH242-172F13,7:120694979-120886569
(Clone quality: bE172F13 on chr=7; Num_of_Contigs=3; )
 
GPR68 location ⇒ 7:120743989-120749149 CT737342,CH242-172F13,7:120694979-120886569
(Clone quality: bE172F13 on chr=7; Num_of_Contigs=3; )
 
GPR68 location ⇒ 7:24917-24994   CU657920,CH242-367F14,7:1-36410
(Clone quality: bE367F14 on chr=7; Num_of_Contigs=10; )
GPR68 location ⇒ 7:4665-4758   CU657920,CH242-367F14,7:1-36410
(Clone quality: bE367F14 on chr=7; Num_of_Contigs=10; )
GPR68 location ⇒ 7:4758-4665   CU657920,CH242-367F14,7:1-36410
(Clone quality: bE367F14 on chr=7; Num_of_Contigs=10; )
GPR75   ENSSSCG00000008413 3:81244800-81246422   CU855592,CH242-276B14,3:81162359-81308523
(Clone quality: bE276B14 on chr=3; Num_of_Contigs=5; )
GPR77 ENSSSCG00000003113 6:36871363-36872376   FP102420,CH242-118A10,6:36863968-36881618
(Clone quality: bE118A10 on chr=6; Num_of_Contigs=13; )
GPR81   ENSSSCG00000009789 14:30181175-30182197   CU468020,CH242-65H10,14:30110535-30186691
(Clone quality: bE65H10 on chr=14; Num_of_Contigs=4; )
GPR82   ENSSSCG00000012254 X:37022751-37023761   FP245418,CH242-239N1,X:36966488-37029290
(Clone quality: bE239N1 on chr=X; Num_of_Contigs=4; )
GPR83   ENSSSCG00000014954 9:26891668-26902989    
GPR85   ENSSSCG00000016642 18:31310393-31311505   FP236565,CH242-12E9,18:31291456-31311577
(Clone quality: bE12E9 on chr=18; Num_of_Contigs=8; )
GPR87   ENSSSCG00000011715 13:74191535-74197639   CU467754,CH242-404L12,13:74141465-74229996
(Clone quality: bE404L12 on chr=13; Num_of_Contigs=3; )
GPR88   ENSSSCG00000006863 4:122491401-122491904    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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