A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LRRC1 location ⇒ 7:31312641-31312522   CU468862,CH242-13D16,7:31196163-31361567
(Clone quality: bE13D16 on chr=7; Num_of_Contigs=1; )
LRRC10B   ENSSSCG00000013088 2:8497505-8498278   CU896534,CH242-169N17,2:8490433-8505834
(Clone quality: bE169N17 on chr=2; Num_of_Contigs=6; )
LRRC16 ENSSSCG00000001100 7:21351576-21536235    
LRRC16 location ⇒ 7:21501555-21501621   CU326397,CH242-173E9,7:21467504-21615283
(Clone quality: bE173E9 on chr=7; Num_of_Contigs=2; )
LRRC16 location ⇒ 7:21501859-21502057   CU326397,CH242-173E9,7:21467504-21615283
(Clone quality: bE173E9 on chr=7; Num_of_Contigs=2; )
LRRC16 location ⇒ 7:21510995-21511109   CU326397,CH242-173E9,7:21467504-21615283
(Clone quality: bE173E9 on chr=7; Num_of_Contigs=2; )
LRRC16 location ⇒ 7:21517297-21517569   CU326397,CH242-173E9,7:21467504-21615283
(Clone quality: bE173E9 on chr=7; Num_of_Contigs=2; )
LRRC16A   ENSSSCG00000001100 7:21351576-21536235    
LRRC16B   ENSSSCG00000002012 7:81562618-81580870   CT961055,CH242-32K2,7:81553653-81626917
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
LRRC17 ENSSSCG00000015419 9:96120453-96136616   CU861937,CH242-180K5,9:96116443-96221394
(Clone quality: bE180K5 on chr=9; Num_of_Contigs=8; )
LRRC17 location ⇒ 9:95933798-95934010   CU993800,CH242-205H9,9:95916615-95944893
(Clone quality: bE205H9 on chr=9; Num_of_Contigs=5; )
LRRC17 location ⇒ 9:96078195-96077772   CU993800,CH242-205H9,9:96076798-96084473
(Clone quality: bE205H9 on chr=9; Num_of_Contigs=5; )
LRRC17 location ⇒ 9:96120312-96121224   CU861937,CH242-180K5,9:96116443-96221394
(Clone quality: bE180K5 on chr=9; Num_of_Contigs=8; )
LRRC17 location ⇒ 9:96136147-96136570   CU861937,CH242-180K5,9:96116443-96221394
(Clone quality: bE180K5 on chr=9; Num_of_Contigs=8; )
LRRC18   ENSSSCG00000010384 14:93397281-93398048   CU468474,CH242-268N12,14:93394915-93488496
(Clone quality: bE268N12 on chr=14; Num_of_Contigs=4; )
LRRC19   ENSSSCG00000005125 1:205377126-205381507   CU313306,CH242-263I20,1:205257395-205450475
(Clone quality: bE263I20 on chr=1; Num_of_Contigs=1; )
LRRC20   ENSSSCG00000010267 14:76343311-76420057    
LRRC21 ENSSSCG00000010349 14:88917283-88927664   CU607038,CH242-240O5,14:88865868-89075009
(Clone quality: bE240O5 on chr=14; Num_of_Contigs=1; )
LRRC21 location ⇒ 14:88808800-88808495   CU633218,CH242-144B15,14:88679736-88865867
(Clone quality: bE144B15 on chr=14; Num_of_Contigs=2; )
LRRC21 location ⇒ 14:88812620-88812394   CU633218,CH242-144B15,14:88679736-88865867
(Clone quality: bE144B15 on chr=14; Num_of_Contigs=2; )
LRRC21 location ⇒ 14:88919777-88919470   CU607038,CH242-240O5,14:88865868-89075009
(Clone quality: bE240O5 on chr=14; Num_of_Contigs=1; )
LRRC21 location ⇒ 14:88923596-88923370   CU607038,CH242-240O5,14:88865868-89075009
(Clone quality: bE240O5 on chr=14; Num_of_Contigs=1; )
LRRC22 ENSSSCG00000010347 14:88796298-88911177    
LRRC22 location ⇒ 1:19294711-19294049   CU466535,CH242-35E13,1:19292456-19337955
(Clone quality: bE35E13 on chr=1; Num_of_Contigs=9; )
LRRC23   ENSSSCG00000000679 5:59850340-59858348   CU457492,CH242-370K21,5:59848155-59863134
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
LRRC24 location ⇒ 4:245338-245757   CU468612,CH242-60P12,4:229143-247683
(Clone quality: bE60P12 on chr=4; Num_of_Contigs=10; )
LRRC24 location ⇒ 4:399489-399070   CU468594,CH242-10O17,4:360104-442995
(Clone quality: bE10O17 on chr=4; Num_of_Contigs=10; )
LRRC28 ENSSSCG00000004814 1:145614244-145805689    
LRRC28 location ⇒ 1:145617863-145618092   CU651639,CH242-13E4,1:145561470-145622210
(Clone quality: bE13E4 on chr=1; Num_of_Contigs=6; )
LRRC28 location ⇒ 1:145666884-145667025   CU407145,CH242-161A13,1:145622211-145783790
(Clone quality: bE161A13 on chr=1; Num_of_Contigs=1; )
LRRC28 location ⇒ 1:145742491-145742699   CU407145,CH242-161A13,1:145622211-145783790
(Clone quality: bE161A13 on chr=1; Num_of_Contigs=1; )
LRRC28 location ⇒ 1:145782366-145782525   CU407145,CH242-161A13,1:145622211-145783790
(Clone quality: bE161A13 on chr=1; Num_of_Contigs=1; )
LRRC29   ENSSSCG00000002785 6:13340872-13343216   CU929920,CH242-351A16,6:13336930-13369049
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
LRRC30   ENSSSCG00000003685 6:68660294-68660530    
LRRC32   ENSSSCG00000014869 9:10596177-10598027   CU915508,CH242-467I22,9:10593896-10618993
(Clone quality: bE467I22 on chr=9; Num_of_Contigs=2; )
LRRC36   ENSSSCG00000002779 6:13162701-13248086    
LRRC38   ENSSSCG00000003449 6:50121048-50146515    
LRRC39   ENSSSCG00000006867 4:122810203-122820590   CU137727,CH242-139N24,4:122808555-122821406
(Clone quality: bE139N24 on chr=4; Num_of_Contigs=16; )
LRRC3B   ENSSSCG00000011216 13:11197460-11198239   CU914652,CH242-264G4,13:11196382-11231963
(Clone quality: bE264G4 on chr=13; Num_of_Contigs=9; )
LRRC40   ENSSSCG00000003792 6:100442533-100481544   CU694928,CH242-516C13,6:100384679-100527084
(Clone quality: bE516C13 on chr=6; Num_of_Contigs=2; )
LRRC41   ENSSSCG00000003904 6:118193022-118215312   CU694667,CH242-117A15,6:118158784-118247648
(Clone quality: bE117A15 on chr=6; Num_of_Contigs=3; )
LRRC43   ENSSSCG00000009796 14:30603111-30613395    
LRRC46 ENSSSCG00000017520 12:21593394-21599806   CU655852,CH242-166I5,12:21573723-21615705
(Clone quality: bE166I5 on chr=12; Num_of_Contigs=13; )
LRRC46 location ⇒ 12:21593760-21593859   CU655852,CH242-166I5,12:21573723-21615705
(Clone quality: bE166I5 on chr=12; Num_of_Contigs=13; )
LRRC46 location ⇒ 12:21595865-21595969   CU655852,CH242-166I5,12:21573723-21615705
(Clone quality: bE166I5 on chr=12; Num_of_Contigs=13; )
LRRC46 location ⇒ 12:21598163-21598271   CU655852,CH242-166I5,12:21573723-21615705
(Clone quality: bE166I5 on chr=12; Num_of_Contigs=13; )
LRRC46 location ⇒ 12:21598473-21598543   CU655852,CH242-166I5,12:21573723-21615705
(Clone quality: bE166I5 on chr=12; Num_of_Contigs=13; )
LRRC49   ENSSSCG00000004976 1:176320081-176466881    
LRRC4C ENSSSCG00000013286 2:20374850-20376772 CU607014,CH242-405P18,2:20306522-20463153
(Clone quality: bE405P18 on chr=2; Num_of_Contigs=4; ) 		 
LRRC4C location ⇒ 2:21471987-21472095 CU855649,CH242-282C12,2:21405169-21527575
(Clone quality: bE282C12 on chr=2; Num_of_Contigs=11; ) 		 
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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