A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
NPG3   location ⇒ 13:26044715-26044641   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NPG3   location ⇒ 13:26044977-26044870   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NPG3   location ⇒ 13:26045579-26045381   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NPG4   location ⇒ 13:26044715-26044642   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NPG4   location ⇒ 13:26044977-26044870   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NPG4   location ⇒ 13:26045581-26045381   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NPG5   location ⇒ 13:26044714-26044634   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NPG5   location ⇒ 13:26045037-26044870   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NPG5   location ⇒ 13:26045579-26045382   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
NPHP1 ENSSSCG00000008111 3:41139245-41199489    
NPHS1 ENSSSCG00000002914 6:30424289-30430215   CU466979,CH242-510C11,6:30424288-30445425
(Clone quality: bE510C11 on chr=6; Num_of_Contigs=10; )
NPHS2   ENSSSCG00000015526 9:113621111-113638945   FP090905,CH242-219I21,9:113601272-113651149
(No clone quality info on )
NPL   ENSSSCG00000015554 9:116510654-116516480   CU914751,CH242-417L17,9:116504128-116516594
(Clone quality: bE417L17 on chr=9; Num_of_Contigs=22; )
NPL2   ENSSSCG00000010523 14:113801625-113828756   CU407093,CH242-523G22,14:113665116-113843304
(Clone quality: bE523G22 on chr=14; Num_of_Contigs=4; )
NPM1 ENSSSCG00000016998 16:49847186-49861647    
NPM1 location ⇒ 16:49847562-49847188   CU915526,CH242-84K24,16:49844052-49849256
(Clone quality: bE84K24 on chr=16; Num_of_Contigs=2; )
NPM1 location ⇒ 16:49857780-49857672   CU915526,CH242-84K24,16:49849357-49868104
(Clone quality: bE84K24 on chr=16; Num_of_Contigs=2; )
NPM1 location ⇒ 16:49858625-49858504   CU915526,CH242-84K24,16:49849357-49868104
(Clone quality: bE84K24 on chr=16; Num_of_Contigs=2; )
NPM1 location ⇒ 16:49861621-49861465   CU915526,CH242-84K24,16:49849357-49868104
(Clone quality: bE84K24 on chr=16; Num_of_Contigs=2; )
NPM2   ENSSSCG00000009610 14:6158536-6173043   CT737273,CH242-75B21,14:6134462-6252305
(Clone quality: bE75B21 on chr=14; Num_of_Contigs=4; )
NPM3   ENSSSCG00000010568 14:117683069-117685028   CU407015,CH242-119L15,14:117678286-117719308
(Clone quality: bE119L15 on chr=14; Num_of_Contigs=5; )
NPNT location ⇒ 8:99444007-99443949   CU930042,CH242-378B3,8:99440696-99445263
(Clone quality: bE378B3 on chr=8; Num_of_Contigs=28; )
NPNT location ⇒ 8:99444193-99444112   CU930042,CH242-378B3,8:99440696-99445263
(Clone quality: bE378B3 on chr=8; Num_of_Contigs=28; )
NPNT location ⇒ 8:99444543-99444266   CU930042,CH242-378B3,8:99440696-99445263
(Clone quality: bE378B3 on chr=8; Num_of_Contigs=28; )
NPNT location ⇒ 8:99447407-99447145   CU930042,CH242-378B3,8:99445364-99454025
(Clone quality: bE378B3 on chr=8; Num_of_Contigs=28; )
NPPA ENSSSCG00000003430 6:48791893-48793763   CU695168,CH242-2E14,6:48789218-48811910
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
NPPA location ⇒ 6:48793472-48793141   CU695168,CH242-2E14,6:48789218-48811910
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
NPPA location ⇒ 6:48793695-48793566   CU695168,CH242-2E14,6:48789218-48811910
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
NPPC location ⇒ 15:124930818-124930727   CU466945,CH242-470H6,15:124930542-124947388
(Clone quality: bE470H6 on chr=15; Num_of_Contigs=4; )
NPR1   ENSSSCG00000006572 4:100100834-100234310    
NPR2   ENSSSCG00000005322 1:247610828-247621487   CU074289,CH242-130G19,1:247583036-247668986
(Clone quality: bE130G19 on chr=1; Num_of_Contigs=3; )
NPR3   ENSSSCG00000016814 16:16305994-16307185   CU633722,CH242-510K6,16:16297910-16308172
(Clone quality: bE510K6 on chr=16; Num_of_Contigs=17; )
NPSR1   ENSSSCG00000016664 18:38106848-38222768    
NPTN ENSSSCG00000001918 7:65217371-65286783    
NPTN location ⇒ 7:65274127-65274204   CU179744,CH242-496I6,7:65233035-65279220
(Clone quality: bE496I6 on chr=7; Num_of_Contigs=4; )
NPTN location ⇒ 7:65277594-65277868   CU179744,CH242-496I6,7:65233035-65279220
(Clone quality: bE496I6 on chr=7; Num_of_Contigs=4; )
NPTN location ⇒ 7:65285612-65285686   CU179744,CH242-496I6,7:65279321-65370143
(Clone quality: bE496I6 on chr=7; Num_of_Contigs=4; )
NPTN location ⇒ 7:65286227-65286613   CU179744,CH242-496I6,7:65279321-65370143
(Clone quality: bE496I6 on chr=7; Num_of_Contigs=4; )
NPTX1 ENSSSCG00000017144 12:1005085-1011049    
NPTX2   ENSSSCG00000007603 3:4864740-4873303   CU468699,CH242-221N24,3:4863795-4891069
(Clone quality: bE221N24 on chr=3; Num_of_Contigs=13; )
NPTXR   ENSSSCG00000000092 5:5409889-5428631   CU655907,CH242-193M24,5:5409873-5436621
(Clone quality: bE193M24 on chr=5; Num_of_Contigs=6; )
NPVF   ENSSSCG00000016712 18:45857905-45862241   FP236676,CH242-236O10,18:45838364-45862827
(Clone quality: bE236O10 on chr=18; Num_of_Contigs=8; )
NPW   ENSSSCG00000008037 3:36391777-36392527   FP102350,CH242-207G4,3:36381586-36396803
(Clone quality: bE207G4 on chr=3; Num_of_Contigs=8; )
NPY   ENSSSCG00000016718 18:46829972-46838006   CU929482,CH242-2H16,18:46637724-46838893
(Clone quality: bE2H16 on chr=18; Num_of_Contigs=1; )
NPY1R   ENSSSCG00000008888 8:45065967-45067736   CU468109,CH242-275B13,8:45065687-45096941
(Clone quality: bE275B13 on chr=8; Num_of_Contigs=3; )
NPY2R ENSSSCG00000008993 8:63494130-63495278   CU694590,CH242-272O2,8:63493141-63498432
(Clone quality: bE272O2 on chr=8; Num_of_Contigs=8; )
NPY5R   ENSSSCG00000008889 8:45093987-45095270   CU468109,CH242-275B13,8:45065687-45096941
(Clone quality: bE275B13 on chr=8; Num_of_Contigs=3; )
NP_001033055.1   ENSSSCG00000001544 7:35925185-35938804   CU467978,CH242-397F5,7:35872400-35952461
(Clone quality: bE397F5 on chr=7; Num_of_Contigs=4; )
NP_001033055.1   ENSSSCG00000001544 7:35925185-35938804   CU467978,CH242-397F5,7:35872400-35952461
(Clone quality: bE397F5 on chr=7; Num_of_Contigs=4; )
NP_001033720.1   ENSSSCG00000005688 1:284800275-284812975   CU570730,CH242-246K4,1:284778519-284816003
(Clone quality: bE246K4 on chr=1; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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