A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
U6   ENSSSCG00000018830 7:24180254-24180355 FP085562,CH242-160O9,7:24118819-24263585
(Clone quality: bE160O9 on chr=7; Num_of_Contigs=12; ) 		 
U6   ENSSSCG00000018693 4:58969515-58969621   CU151844,CH242-179G3,4:58886071-59001941
(Clone quality: bE179G3 on chr=4; Num_of_Contigs=3; )
U6   ENSSSCG00000018691 12:9668912-9669018   CU655864,CH242-170C16,12:9594640-9727750
(Clone quality: bE170C16 on chr=12; Num_of_Contigs=4; )
U6   ENSSSCG00000018690 1:272089994-272090096   FP236310,CH242-376M18,1:272088684-272100228
(Clone quality: bE376M18 on chr=1; Num_of_Contigs=8; )
U6   ENSSSCG00000018678 3:105411529-105411635   CU571288,CH242-32P1,3:105305392-105483350
(Clone quality: bE32P1 on chr=3; Num_of_Contigs=1; )
U6   ENSSSCG00000018675 2:103004806-103004912   CU856055,CH242-512D9,2:102973891-103040534
(Clone quality: bE512D9 on chr=2; Num_of_Contigs=8; )
U6   ENSSSCG00000018674 6:26028851-26028957   FP102991,CH242-242A6,6:26015384-26043154
(Clone quality: bE242A6 on chr=6; Num_of_Contigs=9; )
U6   ENSSSCG00000018671 14:142638412-142638518   CT954337,CH242-515G21,14:142545734-142683401
(Clone quality: bE515G21 on chr=14; Num_of_Contigs=4; )
U6   ENSSSCG00000018737 5:3712736-3712837   CU407312,CH242-137N12,5:3682722-3817049
(Clone quality: bE137N12 on chr=5; Num_of_Contigs=3; )
U6   ENSSSCG00000018738 9:116519676-116519783   CU914751,CH242-417L17,9:116516695-116522474
(Clone quality: bE417L17 on chr=9; Num_of_Contigs=22; )
U6   ENSSSCG00000018740 1:210316601-210316704   CU651597,CH242-112J16,1:210311258-210361052
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
U6   ENSSSCG00000018697 4:29349043-29349148   CU407273,CH242-480D10,4:29311467-29372690
(Clone quality: bE480D10 on chr=4; Num_of_Contigs=2; )
U6   ENSSSCG00000018703 13:78049440-78049546   CU856449,CH242-169D15,13:78005693-78050348
(Clone quality: bE169D15 on chr=13; Num_of_Contigs=5; )
U6   ENSSSCG00000018711 12:33527929-33528035   FP017165,CH242-105H19,12:33525751-33550362
(Clone quality: bE105H19 on chr=12; Num_of_Contigs=11; )
U6   ENSSSCG00000018828 X:107146705-107146811 CU928389,CH242-213P3,X:107138145-107156846
(Clone quality: bE213P3 on chr=X; Num_of_Contigs=5; ) 		 
U6   ENSSSCG00000018146 X:46750899-46751005   CU210851,CH242-402H2,X:46735513-46778001
(Clone quality: bE402H2 on chr=X; Num_of_Contigs=8; )
U6   ENSSSCG00000018874 X:36545914-36546007   CU861899,CH242-15C8,X:36531562-36571587
(Clone quality: bE15C8 on chr=X; Num_of_Contigs=7; )
U6   ENSSSCG00000018800 18:20338566-20338672   FP236412,CH242-142I21,18:20319130-20340809
(Clone quality: bE142I21 on chr=18; Num_of_Contigs=8; )
U6   ENSSSCG00000018730 13:3759027-3759130   CU928106,CH242-375K11,13:3742460-3759142
(Clone quality: bE375K11 on chr=13; Num_of_Contigs=6; )
U6   ENSSSCG00000018725 5:527240-527346   CU633534,CH242-134B8,5:437182-555725
(Clone quality: bE134B8 on chr=5; Num_of_Contigs=5; )
U6   ENSSSCG00000018722 9:49990533-49990639   FP101896,CH242-264H22,9:49928809-50011045
(Clone quality: bE264H22 on chr=9; Num_of_Contigs=1; )
U6   ENSSSCG00000018721 14:92585196-92585302   CU407059,CH242-262G17,14:92510510-92628099
(Clone quality: bE262G17 on chr=14; Num_of_Contigs=4; )
U6   ENSSSCG00000018720 12:47180517-47180623   FP236385,CH242-124I22,12:47178972-47181338
(Clone quality: bE124I22 on chr=12; Num_of_Contigs=11; )
U6   ENSSSCG00000018138 13:124750960-124751066   CU468904,CH242-93O4,13:124720580-124755634
(Clone quality: bE93O4 on chr=13; Num_of_Contigs=15; )
U6   ENSSSCG00000018799 6:33457521-33457623   FP102369,CH242-128M4,6:33418239-33494326
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
U6   ENSSSCG00000018797 2:49429114-49429220   FP089464,CH242-231P22,2:49368415-49462890
(Clone quality: bE231P22 on chr=2; Num_of_Contigs=4; )
U6   ENSSSCG00000018744 13:133514172-133514275   CU914368,CH242-2C17,13:133510058-133531964
(Clone quality: bE2C17 on chr=13; Num_of_Contigs=5; )
U6   ENSSSCG00000018668 6:115066418-115066523   CU929893,CH242-230N23,6:115029087-115171559
(Clone quality: bE230N23 on chr=6; Num_of_Contigs=5; )
U6   ENSSSCG00000019073 4:104881483-104881590   CU468525,CH242-91D20,4:104823540-104986257
(Clone quality: bE91D20 on chr=4; Num_of_Contigs=8; )
U6   ENSSSCG00000019024 7:53521458-53521563   CT967296,CH242-156L20,7:53517151-53527494
(Clone quality: bE156L20 on chr=7; Num_of_Contigs=5; )
U6   ENSSSCG00000019022 5:80042200-80042306   FP102500,CH242-376H18,5:80027334-80044363
(Clone quality: bE376H18 on chr=5; Num_of_Contigs=9; )
U6   ENSSSCG00000019014 14:25190396-25190502   CU468697,CH242-207J21,14:25169326-25194404
(Clone quality: bE207J21 on chr=14; Num_of_Contigs=14; )
U6   ENSSSCG00000019010 6:107659749-107659855   CU656030,CH242-69I11,6:107625833-107714700
(Clone quality: bE69I11 on chr=6; Num_of_Contigs=8; )
U6   ENSSSCG00000019008 6:25063078-25063184   FP236684,CH242-138P17,6:25061460-25099177
(Clone quality: bE138P17 on chr=6; Num_of_Contigs=7; )
U6   ENSSSCG00000019006 1:179728347-179728453   FP074897,CH242-287B14,1:179720592-179730400
(Clone quality: bE287B14 on chr=1; Num_of_Contigs=8; )
U6   ENSSSCG00000019003 2:34704854-34704959 CU856398,CH242-155A2,2:34646074-34786972
(Clone quality: bE155A2 on chr=2; Num_of_Contigs=1; ) 		 
U6   ENSSSCG00000018745 6:39998837-39998943 CU392841,CH242-278D24,6:39964178-40172960
(Clone quality: bE278D24 on chr=6; Num_of_Contigs=11; ) 		 
U6   ENSSSCG00000018756 9:63198332-63198437   FP103014,CH242-134F9,9:63177722-63200801
(Clone quality: bE134F9 on chr=9; Num_of_Contigs=6; )
U6   ENSSSCG00000018137 1:226455259-226455365   CU457399,CH242-185B23,1:226415512-226461501
(Clone quality: bE185B23 on chr=1; Num_of_Contigs=9; )
U6   ENSSSCG00000018791 11:7049773-7049876   CU582939,CH242-154F17,11:6953544-7126433
(Clone quality: bE154F17 on chr=11; Num_of_Contigs=1; )
U6   ENSSSCG00000018789 2:73002424-73002530   CU462937,CH242-315E1,2:72965748-73070688
(Clone quality: bE315E1 on chr=2; Num_of_Contigs=2; )
U6   ENSSSCG00000018784 15:117850081-117850187   CU915477,CH242-294C16,15:117817021-117904599
(Clone quality: bE294C16 on chr=15; Num_of_Contigs=3; )
U6   ENSSSCG00000018781 6:25766185-25766289   FP103061,CH242-281J16,6:25716091-25775491
(Clone quality: bE281J16 on chr=6; Num_of_Contigs=11; )
U6   ENSSSCG00000018780 18:29112292-29112398   CU638829,CH242-160M12,18:28988913-29134832
(Clone quality: bE160M12 on chr=18; Num_of_Contigs=2; )
U6   ENSSSCG00000018779 14:77066726-77066832   CU302246,CH242-40E7,14:76995336-77164798
(Clone quality: bE40E7 on chr=14; Num_of_Contigs=1; )
U6   ENSSSCG00000018133 7:73241209-73241315   CU467919,CH242-401L19,7:73239725-73242111
(Clone quality: bE401L19 on chr=7; Num_of_Contigs=17; )
U6   ENSSSCG00000018778 1:292004446-292004552   CU633704,CH242-304A7,1:291952154-292014076
(Clone quality: bE304A7 on chr=1; Num_of_Contigs=4; )
U6   ENSSSCG00000018136 9:113998976-113999077   CU915447,CH242-124P15,9:113976502-114005129
(Clone quality: bE124P15 on chr=9; Num_of_Contigs=16; )
U6   ENSSSCG00000018771 17:29715599-29715699   CU855841,CH242-38M6,17:29707738-29739561
(Clone quality: bE38M6 on chr=17; Num_of_Contigs=4; )
U6   ENSSSCG00000019001 6:30480153-30480259   CU466979,CH242-510C11,6:30452219-30481257
(Clone quality: bE510C11 on chr=6; Num_of_Contigs=10; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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