A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
U6   ENSSSCG00000018129 3:41892389-41892488   FP102745,CH242-70I16,3:41877454-41897128
(Clone quality: bE70I16 on chr=3; Num_of_Contigs=1; )
U6   ENSSSCG00000018870 3:34349689-34349794   FP236591,CH242-512G22,3:34348790-34357103
(Clone quality: bE512G22 on chr=3; Num_of_Contigs=24; )
U6   ENSSSCG00000018126 18:7568245-7568351   CU861954,CH242-234F22,18:7394978-7580916
(Clone quality: bE234F22 on chr=18; Num_of_Contigs=1; )
U6   ENSSSCG00000018861 17:63885746-63885852   CU639433,CH242-17A3,17:63872680-63900421
(Clone quality: bE17A3 on chr=17; Num_of_Contigs=7; )
U6   ENSSSCG00000018128 1:280449574-280449681   CU468031,CH242-524N14,1:280318183-280492192
(Clone quality: bE524N14 on chr=1; Num_of_Contigs=1; )
U6   ENSSSCG00000018848 17:39544628-39544736   CU855967,CH242-138N13,17:39542196-39548712
(Clone quality: bE138N13 on chr=17; Num_of_Contigs=11; )
U6   ENSSSCG00000018844 16:33001362-33001469   FP102257,CH242-480G7,16:32984645-33007020
(Clone quality: bE480G7 on chr=16; Num_of_Contigs=4; )
U6   ENSSSCG00000018840 8:89591523-89591629   CU638686,CH242-511I21,8:89441314-89612797
(Clone quality: bE511I21 on chr=8; Num_of_Contigs=2; )
U6   ENSSSCG00000018833 15:55388399-55388501   CU928097,CH242-243D24,15:55382612-55415875
(Clone quality: bE243D24 on chr=15; Num_of_Contigs=16; )
U6   ENSSSCG00000018853 1:222720982-222721088   CU407272,CH242-479H6,1:222680827-222855981
(Clone quality: bE479H6 on chr=1; Num_of_Contigs=1; )
U6   ENSSSCG00000018120 9:39686287-39686393   CU633342,CH242-144O17,9:39615530-39696526
(Clone quality: bE144O17 on chr=9; Num_of_Contigs=2; )
U6   ENSSSCG00000018822 12:41347341-41347452   CU469262,CH242-13F24,12:41331851-41361647
(Clone quality: bE13F24 on chr=12; Num_of_Contigs=8; )
U6   ENSSSCG00000018818 1:225050907-225051011   CU407257,CH242-454P17,1:225021962-225055378
(Clone quality: bE454P17 on chr=1; Num_of_Contigs=8; )
U6   ENSSSCG00000018811 1:60391223-60391329   FP089480,CH242-211K7,1:60375460-60401299
(Clone quality: bE211K7 on chr=1; Num_of_Contigs=6; )
U6   ENSSSCG00000018767 2:63613965-63614071   CU929613,CH242-284O23,2:63597583-63640334
(Clone quality: bE284O23 on chr=2; Num_of_Contigs=6; )
U6   ENSSSCG00000018807 6:40069482-40069588 CU392841,CH242-278D24,6:39964178-40172960
(Clone quality: bE278D24 on chr=6; Num_of_Contigs=11; ) 		 
U6   ENSSSCG00000018804 15:14677261-14677364   FP067389,CH242-65H9,15:14640806-14693713
(Clone quality: bE65H9 on chr=15; Num_of_Contigs=4; )
U6   ENSSSCG00000018803 16:697850-697957   CU466501,CH242-511N12,16:667266-698041
(Clone quality: bE511N12 on chr=16; Num_of_Contigs=8; )
U6   ENSSSCG00000018802 X:31994898-31995003   FP101893,CH242-249J24,X:31967709-32027795
(Clone quality: bE249J24 on chr=X; Num_of_Contigs=3; )
U6   ENSSSCG00000018123 15:106077349-106077455   CU928628,CH242-217M4,15:106068156-106082748
(Clone quality: bE217M4 on chr=15; Num_of_Contigs=4; )
U6   ENSSSCG00000018808 8:16349382-16349494   FP016162,CH242-121H18,8:16337509-16378199
(Clone quality: bE121H18 on chr=8; Num_of_Contigs=5; )
U6   ENSSSCG00000018832 11:7234265-7234368   CU582935,CH242-109B6,11:7217695-7243334
(Clone quality: bE109B6 on chr=11; Num_of_Contigs=9; )
U6   ENSSSCG00000018809 9:95835577-95835684   CU657969,CH242-168I18,9:95825176-95839886
(Clone quality: bE168I18 on chr=9; Num_of_Contigs=11; )
U6   ENSSSCG00000018863 6:38725521-38725627   CU464193,CH242-278I19,6:38707750-38735535
(Clone quality: bE278I19 on chr=6; Num_of_Contigs=12; )
U6atac   ENSSSCG00000018216 17:5324105-5324221   CU896622,CH242-393D10,17:5287331-5325050
(Clone quality: bE393D10 on chr=17; Num_of_Contigs=1; )
U8   ENSSSCG00000018956 14:121860092-121860214   CU468538,CH242-506P22,14:121852608-121861523
(Clone quality: bE506P22 on chr=14; Num_of_Contigs=15; )
U8   ENSSSCG00000018990 X:20877241-20877375 FP101977,CH242-113I11,X:20869447-20900822
(Clone quality: bE113I11 on chr=X; Num_of_Contigs=2; ) 		 
U8   ENSSSCG00000018707 X:21058804-21058938   CU928861,CH242-88C2,X:21043197-21063351
(Clone quality: bE88C2 on chr=X; Num_of_Contigs=19; )
UACA   ENSSSCG00000004973 1:176106403-176166536    
UAP1   ENSSSCG00000006340 4:91715409-91749383   CU582933,CH242-9F13,4:91698822-91785990
(Clone quality: bE9F13 on chr=4; Num_of_Contigs=3; )
UATP.I ENSSSCG00000017754 12:42052998-42066816    
UATP.I location ⇒ 12:42060082-42060289   CU972495,CH242-385A7,12:42059021-42067741
(Clone quality: bE385A7 on chr=12; Num_of_Contigs=10; )
UATP.I location ⇒ 12:42061469-42061582   CU972495,CH242-385A7,12:42059021-42067741
(Clone quality: bE385A7 on chr=12; Num_of_Contigs=10; )
UATP.I location ⇒ 12:42065213-42065263   CU972495,CH242-385A7,12:42059021-42067741
(Clone quality: bE385A7 on chr=12; Num_of_Contigs=10; )
UATP.I location ⇒ 12:42066649-42066816   CU972495,CH242-385A7,12:42059021-42067741
(Clone quality: bE385A7 on chr=12; Num_of_Contigs=10; )
UBA1   ENSSSCG00000012270 X:41770940-41947876    
UBA2   ENSSSCG00000002876 6:29488702-29526486   CU929964,CH242-62K4,6:29482801-29678966
(Clone quality: bE62K4 on chr=6; Num_of_Contigs=2; )
UBA5 ENSSSCG00000011631 13:60643343-60792925    
UBA52 ENSSSCG00000013907 2:62547853-62550337   FP102402,CH242-83K20,2:62531972-62552811
(Clone quality: bE83K20 on chr=2; Num_of_Contigs=3; )
UBA52 location ⇒ 14:28261132-28261341   CU633504,CH242-250J21,14:28247322-28271876
(Clone quality: bE250J21 on chr=14; Num_of_Contigs=3; )
UBA52 location ⇒ 14:39982094-39982589   CU468463,CH242-214J14,14:39967439-39984281
(Clone quality: bE214J14 on chr=14; Num_of_Contigs=5; )
UBA6   ENSSSCG00000008924 8:56345674-56422283    
UBA7   ENSSSCG00000011393 13:27091825-27100758   CU914539,CH242-222N14,13:27078304-27105846
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
UBAC2   ENSSSCG00000009516 11:69032412-69068339    
UBAP2L   ENSSSCG00000006553 4:99515392-99563628   CU856218,CH242-277E7,4:99509313-99581754
(Clone quality: bE277E7 on chr=4; Num_of_Contigs=4; )
UBASH3B   ENSSSCG00000015136 9:48272269-48307426   CU639472,CH242-130N11,9:48226708-48363863
(Clone quality: bE130N11 on chr=9; Num_of_Contigs=2; )
UBB   ENSSSCG00000018033 12:56213149-56213835   CU927969,CH242-33C22,12:56209473-56233197
(No clone quality info on )
UBC location ⇒ 15:59276509-59276387   CU928371,CH242-359L6,15:59276263-59279042
(Clone quality: bE359L6 on chr=15; Num_of_Contigs=3; )
UBC location ⇒ 15:59276509-59276387   CU928371,CH242-359L6,15:59276263-59279042
(Clone quality: bE359L6 on chr=15; Num_of_Contigs=3; )
UBE2A   ENSSSCG00000012621 X:96618415-96627995   CU467108,CH242-78C24,X:96611677-96643719
(Clone quality: bE78C24 on chr=X; Num_of_Contigs=9; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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