A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
FOXN1 ENSSSCG00000017762 12:42485446-42535186    
FOXN1 location ⇒ 12:42514724-42514665   CU928972,CH242-76A11,12:42514226-42542457
(Clone quality: bE76A11 on chr=12; Note=un_improved;)
FOXN1 location ⇒ 12:42516503-42516392   CU928972,CH242-76A11,12:42514226-42542457
(Clone quality: bE76A11 on chr=12; Note=un_improved;)
FOXN1 location ⇒ 12:42519705-42519247   CU928972,CH242-76A11,12:42514226-42542457
(Clone quality: bE76A11 on chr=12; Note=un_improved;)
FOXN1 location ⇒ 12:42520254-42520100   CU928972,CH242-76A11,12:42514226-42542457
(Clone quality: bE76A11 on chr=12; Note=un_improved;)
FOXN2   ENSSSCG00000008424 3:85652585-85678793    
FOXN3 ENSSSCG00000002429 7:118914420-119213186    
FOXN3 location ⇒ 7:118914812-118914434   CT737419,CH242-216C24,7:118868952-118963392
(Clone quality: bE216C24 on chr=7; Num_of_Contigs=2; )
FOXN3 location ⇒ 7:118915559-118915135   CT737419,CH242-216C24,7:118868952-118963392
(Clone quality: bE216C24 on chr=7; Num_of_Contigs=2; )
FOXN3 location ⇒ 7:118916265-118915629   CT737419,CH242-216C24,7:118868952-118963392
(Clone quality: bE216C24 on chr=7; Num_of_Contigs=2; )
FOXN3 location ⇒ 7:119148435-119147876   CT824637,CH242-207I17,7:119143221-119152105
(Clone quality: bE207I17 on chr=7; Num_of_Contigs=3; )
FOXN4   ENSSSCG00000009936 14:41849454-41856816   CU329699,CH242-335M14,14:41849440-41873706
(Clone quality: bE335M14 on chr=14; Num_of_Contigs=4; )
FOXO1   ENSSSCG00000009370 11:15079672-15081009   CU041328,CH242-22P15,11:15051055-15095564
(Clone quality: bE22P15 on chr=11; Num_of_Contigs=2; )
FOXO1A ENSSSCG00000009370 11:15079672-15081009   CU041328,CH242-22P15,11:15051055-15095564
(Clone quality: bE22P15 on chr=11; Num_of_Contigs=2; )
FOXO1A location ⇒ 11:15079673-15081030   CU041328,CH242-22P15,11:15051055-15095564
(Clone quality: bE22P15 on chr=11; Num_of_Contigs=2; )
FOXO1A location ⇒ 11:15081490-15081585   CU041328,CH242-22P15,11:15051055-15095564
(Clone quality: bE22P15 on chr=11; Num_of_Contigs=2; )
FOXO1A location ⇒ 11:15208015-15207825   CU468420,CH242-359D24,11:15201706-15214620
(Clone quality: bE359D24 on chr=11; Num_of_Contigs=8; )
FOXO1A location ⇒ 11:15208480-15208207   CU468420,CH242-359D24,11:15201706-15214620
(Clone quality: bE359D24 on chr=11; Num_of_Contigs=8; )
FOXO3 ENSSSCG00000004387 1:78223324-78349962    
FOXO3 location ⇒ 1:188087531-188087465   CU606975,CH242-251A8,1:188036812-188088768
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
FOXO3 location ⇒ 1:78349878-78349946 CU062451,CH242-68G2,1:78249941-78414300
(Clone quality: bE68G2 on chr=1; Num_of_Contigs=3; ) 		 
FOXO3 location ⇒ 1:78349963-78350036 CU062451,CH242-68G2,1:78249941-78414300
(Clone quality: bE68G2 on chr=1; Num_of_Contigs=3; ) 		 
FOXO3 location ⇒ 1:78351457-78351509 CU062451,CH242-68G2,1:78249941-78414300
(Clone quality: bE68G2 on chr=1; Num_of_Contigs=3; ) 		 
FOXO3A ENSSSCG00000004387 1:78223324-78349962    
FOXO3A location ⇒ 1:78330789-78331910 CU062451,CH242-68G2,1:78249941-78414300
(Clone quality: bE68G2 on chr=1; Num_of_Contigs=3; ) 		 
FOXO4   ENSSSCG00000012399 X:56862227-56867783   CU468205,CH242-6A14,X:56849541-56908124
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
FOXO6   ENSSSCG00000009371 11:15207819-15208487   CU468420,CH242-359D24,11:15201706-15214620
(Clone quality: bE359D24 on chr=11; Num_of_Contigs=8; )
FOXP1   ENSSSCG00000011515 13:44454448-44523774    
FOXP2   ENSSSCG00000016639 18:30056185-30119712   FP017302,CH242-64F16,18:30046529-30124067
(Clone quality: bE64F16 on chr=18; Num_of_Contigs=5; )
FOXP3 location ⇒ X:42733997-42734082   FP067430,CH242-266D21,X:42733839-42767607
(Clone quality: bE266D21 on chr=X; Num_of_Contigs=12; )
FOXP3 location ⇒ X:42736219-42736370   FP067430,CH242-266D21,X:42733839-42767607
(Clone quality: bE266D21 on chr=X; Num_of_Contigs=12; )
FOXP3 location ⇒ X:42737302-42737382   FP067430,CH242-266D21,X:42733839-42767607
(Clone quality: bE266D21 on chr=X; Num_of_Contigs=12; )
FOXP3 location ⇒ X:42804860-42804752   FP067430,CH242-266D21,X:42803496-42842032
(Clone quality: bE266D21 on chr=X; Num_of_Contigs=12; )
FOXP4   ENSSSCG00000001619 7:42231748-42262989 CT737369,CH242-217D23,7:42195308-42367650
(Clone quality: bE217D23 on chr=7; Num_of_Contigs=4; ) 		 
FOXQ1   ENSSSCG00000000991 7:742869-744870    
FOXR1   ENSSSCG00000015101 9:44799463-44810577   CU695209,CH242-241K21,9:44763573-44853404
(Clone quality: bE241K21 on chr=9; Num_of_Contigs=5; )
FPGS   ENSSSCG00000005622 1:282657378-282659338   CU914182,CH242-198I10,1:282646060-282660880
(Clone quality: bE198I10 on chr=1; Num_of_Contigs=15; )
FPRL2 location ⇒ 1:274910165-274910217   CU467561,CH242-325I3,1:274884171-274929355
(Clone quality: bE325I3 on chr=1; Num_of_Contigs=7; )
FRAG1 ENSSSCG00000014793 9:5655371-5655595   CU914666,CH242-341A4,9:5654753-5657324
(Clone quality: bE341A4 on chr=9; Num_of_Contigs=11; )
FRAS1 ENSSSCG00000005187 1:217060624-217076052    
FRAS1 ENSSSCG00000008991 8:63350532-63390475    
FRAS1 ENSSSCG00000009364 11:13694854-13710828   CU463214,CH242-268J11,11:13647505-13735402
(Clone quality: bE268J11 on chr=11; Num_of_Contigs=4; )
FREM1 ENSSSCG00000005187 1:217060624-217076052    
FREM1 location ⇒ 1:217045886-217045735   CU469077,CH242-416G13,1:217035131-217048796
(Clone quality: bE416G13 on chr=1; Num_of_Contigs=26; )
FREM1 location ⇒ 1:217047770-217047636   CU469077,CH242-416G13,1:217035131-217048796
(Clone quality: bE416G13 on chr=1; Num_of_Contigs=26; )
FREM1 location ⇒ 1:217072534-217072801    
FREM1 location ⇒ 1:217075916-217076028   CU469077,CH242-416G13,1:217072902-217076562
(Clone quality: bE416G13 on chr=1; Num_of_Contigs=26; )
FREM2 ENSSSCG00000009364 11:13694854-13710828   CU463214,CH242-268J11,11:13647505-13735402
(Clone quality: bE268J11 on chr=11; Num_of_Contigs=4; )
FREM2 location ⇒ 11:13835428-13835558   CU633806,CH242-181G7,11:13829398-13853087
(Clone quality: bE181G7 on chr=11; Num_of_Contigs=20; )
FREM2 location ⇒ 11:13836421-13836611   CU633806,CH242-181G7,11:13829398-13853087
(Clone quality: bE181G7 on chr=11; Num_of_Contigs=20; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-22

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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