A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
OIT3   ENSSSCG00000010293 14:79123091-79143513   FP085541,CH242-456C24,14:79114764-79145852
(Clone quality: bE456C24 on chr=14; Num_of_Contigs=9; )
OLA1   ENSSSCG00000015963 15:75043625-75092185    
OLF42-1 ENSSSCG00000001251 7:24952973-24953911 CT737425,CH242-47O8,7:24783186-24956885
(Clone quality: bE47O8 on chr=7; Num_of_Contigs=3; ) 		 
OLF42-2 ENSSSCG00000001251 7:24952973-24953911 CT737425,CH242-47O8,7:24783186-24956885
(Clone quality: bE47O8 on chr=7; Num_of_Contigs=3; ) 		 
OLF42-3 location ⇒ 7:24995255-24995209   CU651654,CH242-447F13,7:24956886-25020051
(Clone quality: bE447F13 on chr=7; Num_of_Contigs=3; )
OLF42-3 location ⇒ 7:25177055-25177101 CU498964,CH242-369A8,7:25131774-25305454
(Clone quality: bE369A8 on chr=7; Num_of_Contigs=2; ) 		 
OLF42-3 location ⇒ 7:25663228-25663182 CU041263,CH242-137G6,7:25493319-25683154
(Clone quality: bE137G6 on chr=7; Num_of_Contigs=4; ) 		 
OLF42-3 location ⇒ 7:85607263-85607201   CU468932,CH242-104D4,7:85535313-85664937
(Clone quality: bE104D4 on chr=7; Num_of_Contigs=4; )
OLFM2   ENSSSCG00000013668 2:53553200-53624351    
OLFM3   ENSSSCG00000006858 4:121670038-121710273   CU302282,CH242-475L13,4:121667397-121714040
(Clone quality: bE475L13 on chr=4; Num_of_Contigs=9; )
OLFM4 ENSSSCG00000009444 11:26947076-26971518    
OLFM4 location ⇒ 11:26947782-26946931   CU694989,CH242-502A17,11:26939855-26958899
(Clone quality: bE502A17 on chr=11; Num_of_Contigs=3; )
OLFML2A   ENSSSCG00000005593 1:280414545-280437309   CU468031,CH242-524N14,1:280318183-280492192
(Clone quality: bE524N14 on chr=1; Num_of_Contigs=1; )
OLFML2B   ENSSSCG00000006345 4:92217470-92254847 CU222533,CH242-452E5,4:92198237-92318951
(Clone quality: bE452E5 on chr=4; Num_of_Contigs=1; ) 		 
OLFML3   ENSSSCG00000006759 4:110911198-110913504   CU138563,CH242-230I15,4:110770286-110949832
(Clone quality: bE230I15 on chr=4; Num_of_Contigs=2; )
OLIG1   ENSSSCG00000012040 13:139063001-139063810   CU633276,CH242-336P19,13:139057097-139068063
(Clone quality: bE336P19 on chr=13; Num_of_Contigs=11; )
OLIG3   ENSSSCG00000004155 1:28254459-28255277   CU302262,CH242-183G23,1:28253889-28341731
(Clone quality: bE183G23 on chr=1; Num_of_Contigs=3; )
OLR1 ENSSSCG00000000647 5:58460108-58471461   CU856657,CH242-24H24,5:58427987-58487085
(Clone quality: bE24H24 on chr=5; Num_of_Contigs=4; )
OLR1 location ⇒ 5:47571850-47571777   CU929167,CH242-455G8,5:47546864-47587749
(Clone quality: bE455G8 on chr=5; Num_of_Contigs=3; )
OLR1 location ⇒ 5:48558568-48558495   FP090906,CH242-226F11,5:48525272-48570496
(Clone quality: bE226F11 on chr=5; Num_of_Contigs=6; )
OLR1 location ⇒ 5:58472554-58472627   CU856657,CH242-24H24,5:58427987-58487085
(Clone quality: bE24H24 on chr=5; Num_of_Contigs=4; )
OLR1 location ⇒ 5:64300469-64300400   CU915469,CH242-24O6,5:64293136-64355627
(Clone quality: bE24O6 on chr=5; Num_of_Contigs=5; )
OMA1   ENSSSCG00000003831 6:109082200-109126907    
OMD ENSSSCG00000008073 3:37497311-37499135   CU855543,CH242-59E5,3:37483230-37518313
(Clone quality: bE59E5 on chr=3; Num_of_Contigs=9; )
OMD location ⇒ 3:37499923-37500399   CU855543,CH242-59E5,3:37483230-37518313
(Clone quality: bE59E5 on chr=3; Num_of_Contigs=9; )
OMG ENSSSCG00000017751 12:41350945-41352267   CU469262,CH242-13F24,12:41331851-41361647
(Clone quality: bE13F24 on chr=12; Num_of_Contigs=8; )
OMG location ⇒ 12:41351577-41352382   CU469262,CH242-13F24,12:41331851-41361647
(Clone quality: bE13F24 on chr=12; Num_of_Contigs=8; )
ONECUT1 ENSSSCG00000004616 1:123663797-123700337   CU075354,CH242-118G20,1:123632126-123705854
(Clone quality: bE118G20 on chr=1; Num_of_Contigs=3; )
ONECUT2   ENSSSCG00000004540 1:109918003-109963770    
ONECUT3   ENSSSCG00000013439 2:46726234-46745102    
OOEP   ENSSSCG00000004285 1:55417083-55418283   CU468562,CH242-237C6,1:55409509-55425182
(Clone quality: bE237C6 on chr=1; Num_of_Contigs=16; )
OPA1   ENSSSCG00000011822 13:98738920-98794321    
OPALIN   ENSSSCG00000010506 14:112850487-112866643    
OPCML ENSSSCG00000015253 9:56900918-57299557    
OPCML location ⇒ 9:57328963-57328825   CU464171,CH242-497F1,9:57327330-57360885
(Clone quality: bE497F1 on chr=9; Num_of_Contigs=5; )
OPCML location ⇒ 9:57422997-57422859   CU694692,CH242-236D22,9:57418782-57473552
(Clone quality: bE236D22 on chr=9; Num_of_Contigs=9; )
OPCML location ⇒ 9:57635517-57635282   CU928985,CH242-36C17,9:57624452-57658792
(Clone quality: bE36C17 on chr=9; Num_of_Contigs=8; )
OPCML location ⇒ 9:57960587-57960443   CU571025,CH242-249H2,9:57897319-57999021
(Clone quality: bE249H2 on chr=9; Num_of_Contigs=2; )
OPLAH   ENSSSCG00000005911 4:556399-565285    
OPN1SW   ENSSSCG00000016580 18:18062320-18065292   CU861972,CH242-288G22,18:18062282-18138680
(Clone quality: bE288G22 on chr=18; Num_of_Contigs=5; )
OPN4   ENSSSCG00000010358 14:91412508-91422761   CU468409,CH242-274C9,14:91325473-91504950
(Clone quality: bE274C9 on chr=14; Num_of_Contigs=1; )
OPRK1 ENSSSCG00000006264 4:80500232-80515208    
OPRK1 location ⇒ 4:80515029-80515208    
OPRM1 location ⇒ 1:13420920-13420402   CU928626,CH242-145A15,1:13410427-13432043
(Clone quality: bE145A15 on chr=1; Num_of_Contigs=12; )
OPRM1 location ⇒ 1:13461911-13461390   CU928626,CH242-145A15,1:13453835-13476610
(Clone quality: bE145A15 on chr=1; Num_of_Contigs=12; )
OPRM1 location ⇒ 1:13524731-13525249   CU928295,CH242-172M10,1:13519666-13551632
(Clone quality: bE172M10 on chr=1; Num_of_Contigs=5; )
OPRM1 location ⇒ 1:13571725-13572246   CU928295,CH242-172M10,1:13568685-13575117
(Clone quality: bE172M10 on chr=1; Num_of_Contigs=5; )
OPRM_PIG   ENSSSCG00000004074 1:13524957-13572249    
OPRS1 location ⇒ 10:30396689-30395612   FP236727,CH242-511I17,10:30394501-30401210
(Clone quality: bE511I17 on chr=10; Num_of_Contigs=7; )
OPRS1 location ⇒ 10:30398306-30398043   FP236727,CH242-511I17,10:30394501-30401210
(Clone quality: bE511I17 on chr=10; Num_of_Contigs=7; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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