A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
FAM126B   ENSSSCG00000016099 15:98335864-98356708    
FAM129A ENSSSCG00000015567 9:118396857-118558753    
FAM129A location ⇒ 9:118408096-118407945   CU861612,CH242-263H4,9:118386474-118510731
(Clone quality: bE263H4 on chr=9; Num_of_Contigs=3; )
FAM129A location ⇒ 9:118411852-118411663   CU861612,CH242-263H4,9:118386474-118510731
(Clone quality: bE263H4 on chr=9; Num_of_Contigs=3; )
FAM129A location ⇒ 9:118417093-118416931   CU861612,CH242-263H4,9:118386474-118510731
(Clone quality: bE263H4 on chr=9; Num_of_Contigs=3; )
FAM129A location ⇒ 9:118558583-118558527   CU861612,CH242-263H4,9:118529872-118565676
(Clone quality: bE263H4 on chr=9; Num_of_Contigs=3; )
FAM129B   ENSSSCG00000005614 1:282362345-282380871    
FAM129C ENSSSCG00000013882 2:61847190-61868586   CU861959,CH242-254K17,2:61845682-61868847
(Clone quality: bE254K17 on chr=2; Num_of_Contigs=9; )
FAM129C location ⇒ 2:61862162-61862059   CU861959,CH242-254K17,2:61845682-61868847
(Clone quality: bE254K17 on chr=2; Num_of_Contigs=9; )
FAM129C location ⇒ 2:61863693-61863581   CU861959,CH242-254K17,2:61845682-61868847
(Clone quality: bE254K17 on chr=2; Num_of_Contigs=9; )
FAM129C location ⇒ 2:61866164-61866079   CU861959,CH242-254K17,2:61845682-61868847
(Clone quality: bE254K17 on chr=2; Num_of_Contigs=9; )
FAM131B   ENSSSCG00000016463 18:5891422-5897957   CU928380,CH242-107B19,18:5868328-5998133
(Clone quality: bE107B19 on chr=18; Num_of_Contigs=4; )
FAM131C   ENSSSCG00000003470 6:51594484-51602014   FP103064,CH242-117J7,6:51590844-51611098
(Clone quality: bE117J7 on chr=6; Num_of_Contigs=6; )
FAM132A   ENSSSCG00000003333 6:42819953-42824825    
FAM132B   ENSSSCG00000016337 15:130227521-130234265   FP104536,CH242-282H12,15:130227243-130234895
(Clone quality: bE282H12 on chr=15; Num_of_Contigs=10; )
FAM133A   ENSSSCG00000012505 X:79558923-79559663 CU861898,CH242-119M19,X:79546537-79610425
(Clone quality: bE119M19 on chr=X; Num_of_Contigs=6; ) 		 
FAM134A   ENSSSCG00000016207 15:114201709-114206495   CU467077,CH242-178P16,15:114185678-114214521
(Clone quality: bE178P16 on chr=15; Num_of_Contigs=9; )
FAM134B   ENSSSCG00000016792 16:5155668-5356469    
FAM134C   ENSSSCG00000017395 12:17777665-17798308    
FAM135A   ENSSSCG00000004275 1:53048513-53166595    
FAM135B   ENSSSCG00000005939 4:3269610-3358600    
FAM13A   ENSSSCG00000009207 8:111994156-112016343    
FAM13C   ENSSSCG00000010209 14:65037435-65167458   CT827947,CH242-238I17,14:64983977-65177528
(Clone quality: bE238I17 on chr=14; Num_of_Contigs=1; )
FAM149A   ENSSSCG00000015802 15:44327768-44351706    
FAM14A ENSSSCG00000002472 7:123699144-123706125   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
FAM14A location ⇒ 7:123693284-123693441   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
FAM14A location ⇒ 7:123694259-123694389   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
FAM14A location ⇒ 7:123695954-123696118   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
FAM14A location ⇒ 7:123696606-123696834   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
FAM151B   ENSSSCG00000014123 2:78427262-78457061   CU856245,CH242-265A18,2:78420705-78489291
(Clone quality: bE265A18 on chr=2; Num_of_Contigs=3; )
FAM154A   ENSSSCG00000005176 1:212809176-212809928    
FAM154B   ENSSSCG00000001791 7:56917115-56936896    
FAM155A   ENSSSCG00000009537 11:75378977-75414777   CT963127,CH242-475G12,11:75342008-75552290
(Clone quality: bE475G12 on chr=11; Num_of_Contigs=1; )
FAM155B   ENSSSCG00000012386 X:55788034-55812607   CU929942,CH242-488P24,X:55776125-55835310
(Clone quality: bE488P24 on chr=X; Num_of_Contigs=8; )
FAM158A   ENSSSCG00000002005 7:81499990-81502663   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
FAM160A1   ENSSSCG00000009016 8:66412753-66484938    
FAM160A2   ENSSSCG00000014632 9:2732679-2743001    
FAM160B1   ENSSSCG00000010652 14:131030054-131064184 CT826382,CH242-129I10,14:130924258-131100240
(Clone quality: bE129I10 on chr=14; Num_of_Contigs=2; ) 		 
FAM160B2   ENSSSCG00000009614 14:6315415-6331040   CT737273,CH242-75B21,14:6289244-6343920
(Clone quality: bE75B21 on chr=14; Num_of_Contigs=4; )
FAM161A   ENSSSCG00000008378 3:73516906-73533239    
FAM161B   ENSSSCG00000002353 7:105259744-105272410   CT797481,CH242-31K14,7:105227853-105414617
(Clone quality: bE31K14 on chr=7; Num_of_Contigs=1; )
FAM162B   ENSSSCG00000004260 1:46871399-46879395   CU407116,CH242-348P6,1:46855813-46880307
(Clone quality: bE348P6 on chr=1; Num_of_Contigs=11; )
FAM163A   ENSSSCG00000015529 9:113926765-113927690   CU928571,CH242-457E21,9:113926439-113931649
(Clone quality: bE457E21 on chr=9; Num_of_Contigs=20; )
FAM164A   ENSSSCG00000006162 4:59817870-59874570   CU469062,CH242-83E10,4:59805393-59988276
(Clone quality: bE83E10 on chr=4; Num_of_Contigs=1; )
FAM164C   ENSSSCG00000002380 7:106520105-106526948 CT737372,CH242-134B18,7:106458379-106624048
(Clone quality: bE134B18 on chr=7; Num_of_Contigs=4; ) 		 
FAM166A   ENSSSCG00000005848 1:294343524-294347323   CU928955,CH242-34I15,1:294322778-294354935
(Clone quality: bE34I15 on chr=1; Num_of_Contigs=4; )
FAM166B   ENSSSCG00000005309 1:247415230-247417339   CU062653,CH242-128J7,1:247267936-247426658
(Clone quality: bE128J7 on chr=1; Num_of_Contigs=2; )
FAM167B   ENSSSCG00000003616 6:60902939-60904254   FP102820,CH242-217B19,6:60902280-60909314
(Clone quality: bE217B19 on chr=6; Num_of_Contigs=18; )
FAM169A   ENSSSCG00000014076 2:72786676-72835491   CU657963,CH242-277N12,2:72737817-72842780
(Clone quality: bE277N12 on chr=2; Num_of_Contigs=6; )
FAM169B   ENSSSCG00000004810 1:144820743-144904285    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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