A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
Q6EEI2_PIG   ENSSSCG00000010326 14:83630626-83630706   FP085540,CH242-488K11,14:83618143-83657205
(Clone quality: bE488K11 on chr=14; Num_of_Contigs=2; )
Q6EEI7_PIG   ENSSSCG00000011038 10:42350448-42387750    
Q6EEI7_PIG   ENSSSCG00000011038 10:42350448-42387750    
Q6H2X9_PIG   ENSSSCG00000017581 12:24681959-24682484   CU694879,CH242-301O20,12:24681689-24690254
(Clone quality: bE301O20 on chr=12; Num_of_Contigs=13; )
Q6IWK1_PIG   ENSSSCG00000005123 1:205142406-205148310   CU914577,CH242-185B21,1:205129086-205152557
(Clone quality: bE185B21 on chr=1; Num_of_Contigs=16; )
Q6LEP1_PIG   ENSSSCG00000012405 X:57341156-57345989   CU469343,CH242-396K9,X:57340938-57361436
(Clone quality: bE396K9 on chr=X; Num_of_Contigs=18; )
Q6PU47_PIG   ENSSSCG00000011513 13:43346034-43346330   CU896681,CH242-472G6,13:43342560-43347305
(Clone quality: bE472G6 on chr=13; Num_of_Contigs=16; )
Q6PUF6_PIG   ENSSSCG00000008843 8:36147026-36147205   CU914686,CH242-88C12,8:36111019-36155236
(Clone quality: bE88C12 on chr=8; Num_of_Contigs=7; )
Q6QAP8_PIG   ENSSSCG00000014340 2:127891644-127891748   CU463907,CH242-154P16,2:127890491-127895025
(Clone quality: bE154P16 on chr=2; Num_of_Contigs=13; )
Q6QAP9_PIG   ENSSSCG00000011471 13:33591809-33599601   CU855562,CH242-255O5,13:33589734-33599949
(Clone quality: bE255O5 on chr=13; Num_of_Contigs=9; )
Q6QAR7_PIG   ENSSSCG00000005701 1:285639680-285695239    
Q6QAS5_PIG   ENSSSCG00000005612 1:282311844-282315322   CU407118,CH242-357D18,1:282306955-282321774
(Clone quality: bE357D18 on chr=1; Num_of_Contigs=10; )
Q6QAS8_PIG   ENSSSCG00000007946 3:33998010-34000352    
Q6R6N1_PIG   ENSSSCG00000013254 2:14081811-14107682   FP067428,CH242-183B23,2:14049372-14139634
(Clone quality: bE183B23 on chr=2; Num_of_Contigs=2; )
Q6R6N1_PIG   ENSSSCG00000013254 2:14081811-14107682   FP067428,CH242-183B23,2:14049372-14139634
(Clone quality: bE183B23 on chr=2; Num_of_Contigs=2; )
Q6RVD5_PIG   ENSSSCG00000015787 15:43234371-43235602   CU928291,CH242-45D7,15:43231555-43238661
(Clone quality: bE45D7 on chr=15; Num_of_Contigs=3; )
Q6SQI4_PIG   ENSSSCG00000000757 5:64484120-64491491    
Q6T4P2_PIG   ENSSSCG00000012439 X:61621789-61622168   CU638862,CH242-477H4,X:61621217-61625220
(Clone quality: bE477H4 on chr=X; Num_of_Contigs=10; )
Q6TM04_PIG   ENSSSCG00000000707 5:60305899-60330905   CU633552,CH242-193I18,5:60298855-60344524
(Clone quality: bE193I18 on chr=5; Num_of_Contigs=2; )
Q6TM04_PIG   ENSSSCG00000000707 5:60305899-60330905   CU633552,CH242-193I18,5:60298855-60344524
(Clone quality: bE193I18 on chr=5; Num_of_Contigs=2; )
Q6UV39_PIG   ENSSSCG00000005394 1:254650443-254656891   CU469282,CH242-469F7,1:254635390-254656977
(Clone quality: bE469F7 on chr=1; Num_of_Contigs=22; )
Q6UWH0 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
Q6V2D4_PIG   ENSSSCG00000014345 2:128320542-128338611   FP101965,CH242-45H7,2:128263088-128357212
(Clone quality: bE45H7 on chr=2; Num_of_Contigs=5; )
Q6V2D4_PIG   ENSSSCG00000014353 2:128463098-128481166   FP102079,CH242-22H3,2:128458813-128522338
(Clone quality: bE22H3 on chr=2; Num_of_Contigs=6; )
Q6XJV0_PIG   ENSSSCG00000013193 2:11696130-11697071   CU694285,CH242-69H5,2:11633212-11719373
(Clone quality: bE69H5 on chr=2; Num_of_Contigs=7; )
Q6YSS8_PIG   ENSSSCG00000011320 13:24572633-24575388   CU914332,CH242-66E24,13:24531631-24590696
(Clone quality: bE66E24 on chr=13; Num_of_Contigs=2; )
Q6YSS9_PIG   ENSSSCG00000011321 13:24592762-24592881   CU914332,CH242-66E24,13:24590797-24641499
(Clone quality: bE66E24 on chr=13; Num_of_Contigs=2; )
Q6YT48_PIG   ENSSSCG00000011315 13:24442675-24446273   CU469254,CH242-75A24,13:24398824-24519472
(Clone quality: bE75A24 on chr=13; Num_of_Contigs=4; )
Q700R3_PIG   ENSSSCG00000001548 7:36024406-36024597   CU424481,CH242-125B19,7:36018736-36025906
(Clone quality: bE125B19 on chr=7; Num_of_Contigs=28; )
Q700R8_PIG   ENSSSCG00000001120 7:21947074-21953222   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
Q70EK5_PIG   ENSSSCG00000009003 8:64396707-64396994   FP086612,CH242-215B19,8:64380629-64492930
(Clone quality: bE215B19 on chr=8; Num_of_Contigs=1; )
Q70ES4_PIG   ENSSSCG00000010380 14:92852332-92883692   CU468448,CH242-111N17,14:92833507-92886361
(Clone quality: bE111N17 on chr=14; Num_of_Contigs=5; )
Q70ES4_PIG   ENSSSCG00000010380 14:92852332-92883692   CU468448,CH242-111N17,14:92833507-92886361
(Clone quality: bE111N17 on chr=14; Num_of_Contigs=5; )
Q70ES6_PIG   ENSSSCG00000006818 4:114797730-114798410   CU570995,CH242-11B15,4:114797095-114802542
(Clone quality: bE11B15 on chr=4; Num_of_Contigs=17; )
Q70ES6_PIG   ENSSSCG00000006815 4:114628587-114641232    
Q71A32_PIG   ENSSSCG00000015910 15:67849371-67882854    
Q71A32_PIG   ENSSSCG00000015910 15:67849371-67882854    
Q71V41_PIG   ENSSSCG00000004086 1:15672455-15672871   FP091232,CH242-262E22,1:15672454-15684350
(Clone quality: bE262E22 on chr=1; Num_of_Contigs=5; )
Q764N0_PIG   ENSSSCG00000008213 3:52716117-52821936    
Q767L5_PIG   ENSSSCG00000001381 7:27223053-27223870 CT971577,CH242-239H1,7:27216113-27394697
(Clone quality: bE239H1 on chr=7; Num_of_Contigs=1; ) 		 
Q76LB6_PIG   ENSSSCG00000012344 X:47452432-47459401    
Q7YS25_PIG   ENSSSCG00000013354 2:37465463-37486816   CU929970,CH242-88H14,2:37460475-37487234
(Clone quality: bE88H14 on chr=2; Num_of_Contigs=9; )
Q7YS25_PIG   ENSSSCG00000013357 2:37534829-37555117    
Q863D2_PIG   ENSSSCG00000013067 2:7743107-7746664    
Q863D3_PIG   ENSSSCG00000013068 2:7751561-7752532   FP102181,CH242-239P5,2:7749614-7754412
(Clone quality: bE239P5 on chr=2; Num_of_Contigs=6; )
Q863I3_PIG   ENSSSCG00000003644 6:63556950-63564232 CR956649,PigE-92E11,6:63451761-63579213
(No clone quality info on bT92E11) 		 
Q863I3_PIG   ENSSSCG00000003647 6:63789363-63792095   FP102603,CH242-181G10,6:63787613-63793242
(Clone quality: bE181G10 on chr=6; Num_of_Contigs=12; )
Q865G3_PIG   ENSSSCG00000014926 9:22741890-22906701    
Q865R9_PIG   ENSSSCG00000011428 13:28824540-28826739   CU914695,CH242-195P19,13:28772257-28826761
(Clone quality: bE195P19 on chr=13; Num_of_Contigs=14; )
Q865X9_PIG   ENSSSCG00000010903 10:21992167-21996354   FP236725,CH242-493N13,10:21969497-21996611
(Clone quality: bE493N13 on chr=10; Num_of_Contigs=8; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-35

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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