A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
GDF8 location ⇒ 15:89152706-89152325   CU928361,CH242-5N19,15:89124576-89153126
(Clone quality: bE5N19 on chr=15; Num_of_Contigs=3; )
GDF8 location ⇒ 15:89154908-89154535   CU928361,CH242-5N19,15:89153227-89170446
(Clone quality: bE5N19 on chr=15; Num_of_Contigs=3; )
GDF8 location ⇒ 15:89157090-89156718   CU928361,CH242-5N19,15:89153227-89170446
(Clone quality: bE5N19 on chr=15; Num_of_Contigs=3; )
GDF9 ENSSSCG00000014288 2:123091507-123095682 CU407038,CH242-18J12,2:123020435-123138962
(Clone quality: bE18J12 on chr=2; Num_of_Contigs=6; ) 		 
GDF9 location ⇒ 2:123092858-123091918 CU407038,CH242-18J12,2:123020435-123138962
(Clone quality: bE18J12 on chr=2; Num_of_Contigs=6; ) 		 
GDF9 location ⇒ 2:123094875-123094478 CU407038,CH242-18J12,2:123020435-123138962
(Clone quality: bE18J12 on chr=2; Num_of_Contigs=6; ) 		 
GDI1 location ⇒ 10:61482968-61482868   FP016185,CH242-75D11,10:61463278-61542880
(Clone quality: bE75D11 on chr=10; Num_of_Contigs=4; )
GDI1 location ⇒ 10:61483416-61483267   FP016185,CH242-75D11,10:61463278-61542880
(Clone quality: bE75D11 on chr=10; Num_of_Contigs=4; )
GDI1 location ⇒ 10:61485010-61484855   FP016185,CH242-75D11,10:61463278-61542880
(Clone quality: bE75D11 on chr=10; Num_of_Contigs=4; )
GDI2 ENSSSCG00000011137 10:61482038-61517785   FP016185,CH242-75D11,10:61463278-61542880
(Clone quality: bE75D11 on chr=10; Num_of_Contigs=4; )
GDI2 location ⇒ 10:61482990-61482038   FP016185,CH242-75D11,10:61463278-61542880
(Clone quality: bE75D11 on chr=10; Num_of_Contigs=4; )
GDI2 location ⇒ 10:61485018-61484845   FP016185,CH242-75D11,10:61463278-61542880
(Clone quality: bE75D11 on chr=10; Num_of_Contigs=4; )
GDI2 location ⇒ 10:61490685-61490487   FP016185,CH242-75D11,10:61463278-61542880
(Clone quality: bE75D11 on chr=10; Num_of_Contigs=4; )
GDI2 location ⇒ 10:61517785-61517545   FP016185,CH242-75D11,10:61463278-61542880
(Clone quality: bE75D11 on chr=10; Num_of_Contigs=4; )
GDNF ENSSSCG00000016847 16:20441100-20441582   CU633723,CH242-522B12,16:20437423-20444873
(Clone quality: bE522B12 on chr=16; Num_of_Contigs=19; )
GDNF ENSSSCG00000010655 14:132100404-132318579    
GDNF ENSSSCG00000009605 14:5589658-5687647    
GDNF ENSSSCG00000007152 17:33631934-33633157   CU468397,CH242-208K2,17:33631873-33707706
(Clone quality: bE208K2 on chr=17; Num_of_Contigs=2; )
GDNF ENSSSCG00000001480 7:30125614-30183094    
GDPD2   ENSSSCG00000012376 X:54769388-54780074 CU463005,CH242-411O22,X:54745943-54944013
(Clone quality: bE411O22 on chr=X; Num_of_Contigs=1; ) 		 
GDPD4   ENSSSCG00000014877 9:11555536-11652880    
GDPD5   ENSSSCG00000014853 9:9289691-9299814    
GEM ENSSSCG00000008482 3:94635887-94640200   FP102731,CH242-53K21,3:94598118-94641842
(Clone quality: bE53K21 on chr=3; Num_of_Contigs=3; )
GEM ENSSSCG00000013931 2:63377883-63386824   FP017144,CH242-263C22,2:63368725-63394740
(Clone quality: bE263C22 on chr=2; Num_of_Contigs=8; )
GEM ENSSSCG00000006105 4:43065408-43076341   CU407285,CH242-511L5,4:43058116-43141915
(Clone quality: bE511L5 on chr=4; Num_of_Contigs=2; )
GEM ENSSSCG00000006992 17:5660747-5663005   CU469367,CH242-177G4,17:5660436-5664016
(Clone quality: bE177G4 on chr=17; Num_of_Contigs=30; )
GEM ENSSSCG00000001095 7:20622259-20631596   CT737315,CH242-160B2,7:20607639-20790901
(Clone quality: bE160B2 on chr=7; Num_of_Contigs=1; )
GEM location ⇒ 4:43073604-43073768   CU407285,CH242-511L5,4:43058116-43141915
(Clone quality: bE511L5 on chr=4; Num_of_Contigs=2; )
GEM location ⇒ 4:43075830-43076341   CU407285,CH242-511L5,4:43058116-43141915
(Clone quality: bE511L5 on chr=4; Num_of_Contigs=2; )
GEMIN4   ENSSSCG00000017809 12:45025109-45028288   CU928997,CH242-26C19,12:45011943-45029530
(Clone quality: bE26C19 on chr=12; Num_of_Contigs=2; )
GEMIN5   ENSSSCG00000017066 16:65637588-65684782    
GEMIN6   ENSSSCG00000008482 3:94635887-94640200   FP102731,CH242-53K21,3:94598118-94641842
(Clone quality: bE53K21 on chr=3; Num_of_Contigs=3; )
GEN1   ENSSSCG00000008613 3:111447381-111476580    
GFAP   ENSSSCG00000017343 12:16317892-16327267   CU896578,CH242-101E18,12:16315123-16339681
(Clone quality: bE101E18 on chr=12; Num_of_Contigs=7; )
GFER   ENSSSCG00000008035 3:36365060-36367569   FP102350,CH242-207G4,3:36359565-36381485
(Clone quality: bE207G4 on chr=3; Num_of_Contigs=8; )
GFI1 ENSSSCG00000006902 4:128849119-128856292    
GFI1B   ENSSSCG00000005737 1:288375523-288396081    
GFM2   ENSSSCG00000014074 2:72717153-72774596    
GFOD1   ENSSSCG00000001054 7:9958079-10067113    
GFPT1   ENSSSCG00000008339 3:67001028-67134175    
GFPT2   ENSSSCG00000014012 2:67758273-67782569    
GFRA1 ENSSSCG00000010655 14:132100404-132318579    
GFRA1 location ⇒ 14:132097548-132097432   CT737173,CH242-124G21,14:132052619-132232429
(Clone quality: bE124G21 on chr=14; Num_of_Contigs=1; )
GFRA1 location ⇒ 14:132128421-132128267   CT737173,CH242-124G21,14:132052619-132232429
(Clone quality: bE124G21 on chr=14; Num_of_Contigs=1; )
GFRA1 location ⇒ 14:132132682-132132547   CT737173,CH242-124G21,14:132052619-132232429
(Clone quality: bE124G21 on chr=14; Num_of_Contigs=1; )
GFRA1 location ⇒ 14:5646717-5646664   CT827819,CH242-131O24,14:5507963-5663104
(Clone quality: bE131O24 on chr=14; Num_of_Contigs=4; )
GFRA2 ENSSSCG00000009605 14:5589658-5687647    
GFRA2 location ⇒ 14:5589719-5589883   CT827819,CH242-131O24,14:5507963-5663104
(Clone quality: bE131O24 on chr=14; Num_of_Contigs=4; )
GFRA2 location ⇒ 14:5600145-5600318   CT827819,CH242-131O24,14:5507963-5663104
(Clone quality: bE131O24 on chr=14; Num_of_Contigs=4; )
GFRA2 location ⇒ 14:5602242-5602381   CT827819,CH242-131O24,14:5507963-5663104
(Clone quality: bE131O24 on chr=14; Num_of_Contigs=4; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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