A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
MAPK14 location ⇒ 7:36432066-36432625   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK14 location ⇒ 7:36432657-36433249   CU407302,CH242-7K1,7:36389187-36527920
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK14 location ⇒ 7:36560025-36560583   CU407302,CH242-7K1,7:36528021-36584617
(Clone quality: bE7K1 on chr=7; Num_of_Contigs=2; )
MAPK1IP1L   ENSSSCG00000005054 1:193031742-193041719    
MAPK3 location ⇒ 14:51173083-51172964   CU657961,CH242-203J11,14:51170539-51174986
(Clone quality: bE203J11 on chr=14; Num_of_Contigs=17; )
MAPK3 location ⇒ 14:51213674-51213725   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
MAPK3 location ⇒ 14:51224932-51225051   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
MAPK4 ENSSSCG00000004520 1:103437190-103507119    
MAPK6 location ⇒ 1:124589336-124588835   CU468047,CH242-327N5,1:124551351-124620384
(Clone quality: bE327N5 on chr=1; Num_of_Contigs=4; )
MAPK6 location ⇒ 1:124591201-124589735   CU468047,CH242-327N5,1:124551351-124620384
(Clone quality: bE327N5 on chr=1; Num_of_Contigs=4; )
MAPK6 location ⇒ 1:124604122-124602929   CU468047,CH242-327N5,1:124551351-124620384
(Clone quality: bE327N5 on chr=1; Num_of_Contigs=4; )
MAPK6 location ⇒ 1:79350332-79353257   CU469325,CH242-24F17,1:79342358-79369539
(Clone quality: bE24F17 on chr=1; Num_of_Contigs=11; )
MAPK8 ENSSSCG00000009228 8:113837962-113973958    
MAPK8 location ⇒ 14:92882529-92882653   CU468448,CH242-111N17,14:92833507-92886361
(Clone quality: bE111N17 on chr=14; Num_of_Contigs=5; )
MAPK8 location ⇒ 14:92882961-92883087   CU468448,CH242-111N17,14:92833507-92886361
(Clone quality: bE111N17 on chr=14; Num_of_Contigs=5; )
MAPK8 location ⇒ 14:93049213-93049087   CT737310,CH242-101E20,14:93032339-93068499
(Clone quality: bE101E20 on chr=14; Num_of_Contigs=2; )
MAPK8 location ⇒ 14:93049645-93049521   CT737310,CH242-101E20,14:93032339-93068499
(Clone quality: bE101E20 on chr=14; Num_of_Contigs=2; )
MAPK8IP1   ENSSSCG00000013269 2:14864195-14884097   FP101987,CH242-521A18,2:14831953-14928280
(Clone quality: bE521A18 on chr=2; Num_of_Contigs=9; )
MAPK8IP3 ENSSSCG00000008018 3:35928846-35972564    
MAPK8IP3 location ⇒ 3:35954998-35954905   CU929968,CH242-75C10,3:35942758-35970321
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
MAPK8IP3 location ⇒ 3:35955148-35955078   CU929968,CH242-75C10,3:35942758-35970321
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
MAPK8IP3 location ⇒ 3:35957613-35957491   CU929968,CH242-75C10,3:35942758-35970321
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
MAPK8IP3 location ⇒ 3:35972422-35972105   CU929968,CH242-75C10,3:35970422-35979551
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
MAPK9 ENSSSCG00000014010 2:67607929-67652119    
MAPK9 location ⇒ 2:67640623-67640805   CU927929,CH242-480L24,2:67623355-67738874
(Clone quality: bE480L24 on chr=2; Num_of_Contigs=16; )
MAPK9 location ⇒ 2:67642403-67642527   CU927929,CH242-480L24,2:67623355-67738874
(Clone quality: bE480L24 on chr=2; Num_of_Contigs=16; )
MAPK9 location ⇒ 2:67651366-67651707   CU927929,CH242-480L24,2:67623355-67738874
(Clone quality: bE480L24 on chr=2; Num_of_Contigs=16; )
MAPK9 location ⇒ 2:67898479-67898138   CU855926,CH242-450C21,2:67895415-67902094
(Clone quality: bE450C21 on chr=2; Num_of_Contigs=28; )
MAPKAPK2 ENSSSCG00000015650 9:131826567-131876037    
MAPKAPK2 location ⇒ 9:131826846-131826960   CU633844,CH242-3I15,9:131812566-131872400
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
MAPKAPK2 location ⇒ 9:131870541-131870680   CU633844,CH242-3I15,9:131812566-131872400
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
MAPKAPK2 location ⇒ 9:131871756-131871884   CU633844,CH242-3I15,9:131812566-131872400
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
MAPKAPK2 location ⇒ 9:131873929-131874034   CU633844,CH242-3I15,9:131872501-131899343
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
MAPKAPK3   ENSSSCG00000011415 13:27794984-27802881   CU467603,CH242-65F21,13:27761884-27812638
(Clone quality: bE65F21 on chr=13; Num_of_Contigs=9; )
MAPKAPK5 ENSSSCG00000009890 14:39859435-39892903    
MAPKAPK5 location ⇒ 14:39882931-39883117   CU468463,CH242-214J14,14:39881895-39899618
(Clone quality: bE214J14 on chr=14; Num_of_Contigs=5; )
MAPKAPK5 location ⇒ 14:39892494-39892936   CU468463,CH242-214J14,14:39881895-39899618
(Clone quality: bE214J14 on chr=14; Num_of_Contigs=5; )
MAPKAPK5 location ⇒ 14:39998130-39997688   CT954275,CH242-297O9,14:39995528-40002857
(Clone quality: bE297O9 on chr=14; Num_of_Contigs=14; )
MAPKAPK5 location ⇒ 14:40023319-40023505   CT954275,CH242-297O9,14:40002958-40025418
(Clone quality: bE297O9 on chr=14; Num_of_Contigs=14; )
MAPKSP1   ENSSSCG00000009176 8:103293154-103309836   FP089503,CH242-496N9,8:103261529-103367524
(Clone quality: bE496N9 on chr=8; Num_of_Contigs=4; )
MAPRE1   ENSSSCG00000007253 17:38395379-38426921   CU179704,CH242-134M1,17:38326500-38527268
(Clone quality: bE134M1 on chr=17; Num_of_Contigs=1; )
MAPRE2   ENSSSCG00000003738 6:82610839-82672971    
MAPT   ENSSSCG00000017311 12:14976040-15084738    
MARCH1   ENSSSCG00000008891 8:45276724-45313561    
MARCH10   ENSSSCG00000017299 12:13460285-13705158    
MARCH11   ENSSSCG00000016790 16:4927895-4929771   FP067383,CH242-447E2,16:4927802-4931408
(Clone quality: bE447E2 on chr=16; Num_of_Contigs=3; )
MARCH2 ENSSSCG00000013601 2:51696984-51712273    
MARCH2 location ⇒ 2:51701797-51702027   FP090904,CH242-212F1,2:51700191-51798128
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
MARCH2 location ⇒ 2:51707008-51707207   FP090904,CH242-212F1,2:51700191-51798128
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
MARCH2 location ⇒ 2:51711906-51711968   FP090904,CH242-212F1,2:51700191-51798128
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-46

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team