A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
U6   ENSSSCG00000019757 1:146464695-146464801   CU914594,CH242-6J4,1:146456319-146468433
(Clone quality: bE6J4 on chr=1; Num_of_Contigs=1; )
U6   ENSSSCG00000019595 12:24858243-24858349   FP236796,CH242-293M16,12:24837180-24867591
(Clone quality: bE293M16 on chr=12; Num_of_Contigs=11; )
U6   ENSSSCG00000019854 14:135805322-135805428   CT955977,CH242-57J13,14:135786220-135964025
(Clone quality: bE57J13 on chr=14; Num_of_Contigs=3; )
U6   ENSSSCG00000019603 4:129725465-129725571   CU856301,CH242-136E2,4:129707698-129730312
(Clone quality: bE136E2 on chr=4; Num_of_Contigs=4; )
U6   ENSSSCG00000019844 4:128473883-128473989   CU151850,CH242-201N15,4:128352763-128480589
(Clone quality: bE201N15 on chr=4; Num_of_Contigs=2; )
U6   ENSSSCG00000019618 1:113029653-113029759   CU929584,CH242-18J11,1:113029165-113032051
(Clone quality: bE18J11 on chr=1; Num_of_Contigs=22; )
U6   ENSSSCG00000019625 14:22230398-22230504   CU468552,CH242-144J21,14:22202815-22258502
(Clone quality: bE144J21 on chr=14; Num_of_Contigs=4; )
U6   ENSSSCG00000019626 7:25149876-25149982 CU498964,CH242-369A8,7:25131774-25305454
(Clone quality: bE369A8 on chr=7; Num_of_Contigs=2; ) 		 
U6   ENSSSCG00000019585 10:65304274-65304380   CU972490,CH242-226K16,10:65277378-65315373
(Clone quality: bE226K16 on chr=10; Num_of_Contigs=8; )
U6   ENSSSCG00000019583 18:17451893-17452000   CU655986,CH242-239L10,18:17438267-17465846
(Clone quality: bE239L10 on chr=18; Num_of_Contigs=6; )
U6   ENSSSCG00000019863 5:31345017-31345118   CU914244,CH242-199F18,5:31344577-31384268
(Clone quality: bE199F18 on chr=5; Num_of_Contigs=7; )
U6   ENSSSCG00000019856 16:11386780-11386886   CU640418,CH242-341B4,16:11306070-11449514
(Clone quality: bE341B4 on chr=16; Num_of_Contigs=1; )
U6   ENSSSCG00000019860 1:249002516-249002617   CU570841,CH242-292L3,1:248941447-249033129
(Clone quality: bE292L3 on chr=1; Num_of_Contigs=3; )
U6   ENSSSCG00000019566 13:63955806-63955912   CU606966,CH242-399P7,13:63942240-63966638
(Clone quality: bE399P7 on chr=13; Num_of_Contigs=24; )
U6   ENSSSCG00000019728 15:64678746-64678852   CU928277,CH242-218D16,15:64652988-64683389
(Clone quality: bE218D16 on chr=15; Num_of_Contigs=11; )
U6   ENSSSCG00000019737 1:185500706-185500812   CU928769,CH242-379K15,1:185491425-185517664
(Clone quality: bE379K15 on chr=1; Num_of_Contigs=1; )
U6   ENSSSCG00000019741 14:138096691-138096784   CU367846,CH242-230N19,14:138026316-138097082
(Clone quality: bE230N19 on chr=14; Num_of_Contigs=4; )
U6   ENSSSCG00000019742 12:36928552-36928658   CU468157,CH242-399I10,12:36783718-36983768
(Clone quality: bE399I10 on chr=12; Num_of_Contigs=1; )
U6   ENSSSCG00000019746 9:26942770-26942876   FP236710,CH242-260H20,9:26908452-26958165
(Clone quality: bE260H20 on chr=9; Num_of_Contigs=2; )
U6   ENSSSCG00000019747 15:5604962-5605068   CU929877,CH242-179J20,15:5536406-5611503
(Clone quality: bE179J20 on chr=15; Num_of_Contigs=5; )
U6   ENSSSCG00000019752 9:67766278-67766384   CU914320,CH242-25I12,9:67627984-67778260
(Clone quality: bE25I12 on chr=9; Num_of_Contigs=2; )
U6   ENSSSCG00000019754 8:54618811-54618916   CU915351,CH242-371H2,8:54609174-54619619
(Clone quality: bE371H2 on chr=8; Num_of_Contigs=6; )
U6   ENSSSCG00000019756 5:57861427-57861533   CU856689,CH242-196F1,5:57732379-57868244
(Clone quality: bE196F1 on chr=5; Num_of_Contigs=2; )
U6   ENSSSCG00000019788 9:70502753-70502861   CU633220,CH242-147O16,9:70459550-70626938
(Clone quality: bE147O16 on chr=9; Num_of_Contigs=1; )
U6   ENSSSCG00000019866 2:116792472-116792579   CU928402,CH242-108N13,2:116782834-116794317
(Clone quality: bE108N13 on chr=2; Num_of_Contigs=5; )
U6   ENSSSCG00000019568 1:150858255-150858357   CU466499,CH242-508L4,1:150857902-150867057
(Clone quality: bE508L4 on chr=1; Num_of_Contigs=19; )
U6   ENSSSCG00000019669 11:68905900-68906006   CU861534,CH242-1K16,11:68845175-68927228
(Clone quality: bE1K16 on chr=11; Num_of_Contigs=7; )
U6   ENSSSCG00000019829 16:41000319-41000423   CU972377,CH242-112M17,16:40907488-41025801
(Clone quality: bE112M17 on chr=16; Num_of_Contigs=2; )
U6   ENSSSCG00000019676 7:73239999-73240105   CU467919,CH242-401L19,7:73239725-73242111
(Clone quality: bE401L19 on chr=7; Num_of_Contigs=17; )
U6   ENSSSCG00000019678 X:19125646-19125750   FP102154,CH242-310I7,X:19061474-19133741
(Clone quality: bE310I7 on chr=X; Num_of_Contigs=5; )
U6   ENSSSCG00000019819 6:11404020-11404126   FP102707,CH242-445G1,6:11400822-11405454
(Clone quality: bE445G1 on chr=6; Num_of_Contigs=10; )
U6   ENSSSCG00000019654 1:3682966-3683065   CU481396,CH242-102H15,1:3660337-3737369
(Clone quality: bE102H15 on chr=1; Num_of_Contigs=6; )
U6   ENSSSCG00000019830 14:30822865-30822971   CT737291,CH242-160P22,14:30791235-30951915
(Clone quality: bE160P22 on chr=14; Num_of_Contigs=1; )
U6   ENSSSCG00000019649 8:88839537-88839640   CU929480,CH242-167L1,8:88823713-88857758
(Clone quality: bE167L1 on chr=8; Num_of_Contigs=7; )
U6   ENSSSCG00000019631 X:71400551-71400657   CU407324,CH242-110M8,X:71399094-71477458
(Clone quality: bE110M8 on chr=X; Num_of_Contigs=3; )
U6   ENSSSCG00000019632 17:22690708-22690810   CU302386,CH242-263M23,17:22676369-22701043
(Clone quality: bE263M23 on chr=17; Num_of_Contigs=3; )
U6   ENSSSCG00000019667 16:63389633-63389736   CU570950,CH242-337F3,16:63356519-63418846
(Clone quality: bE337F3 on chr=16; Num_of_Contigs=6; )
U6   ENSSSCG00000019664 8:108374484-108374588   CU693384,CH242-129O4,8:108277513-108446961
(Clone quality: bE129O4 on chr=8; Num_of_Contigs=4; )
U6   ENSSSCG00000019660 8:7658342-7658448   CU928505,CH242-480J9,8:7638740-7665978
(Clone quality: bE480J9 on chr=8; Num_of_Contigs=4; )
U6   ENSSSCG00000019571 1:30955521-30955626   CU407282,CH242-507C12,1:30953223-30955749
(Clone quality: bE507C12 on chr=1; Num_of_Contigs=11; )
U6   ENSSSCG00000019573 6:10538272-10538373   CU467029,CH242-364E21,6:10531619-10550665
(Clone quality: bE364E21 on chr=6; Num_of_Contigs=16; )
U6   ENSSSCG00000019574 4:67423416-67423519   CU468851,CH242-21K23,4:67394965-67424822
(Clone quality: bE21K23 on chr=4; Num_of_Contigs=3; )
U6   ENSSSCG00000019575 10:12826724-12826827   CU571362,CH242-3K19,10:12813962-12827872
(Clone quality: bE3K19 on chr=10; Num_of_Contigs=5; )
U6   ENSSSCG00000019578 2:65762637-65762743   FP102029,CH242-72P22,2:65762062-65777384
(Clone quality: bE72P22 on chr=2; Num_of_Contigs=3; )
U6   ENSSSCG00000019864 5:64510461-64510566   FP102363,CH242-96D13,5:64501076-64517757
(Clone quality: bE96D13 on chr=5; Num_of_Contigs=18; )
U6   ENSSSCG00000019582 1:68308506-68308612   CU633245,CH242-229N5,1:68302666-68320738
(Clone quality: bE229N5 on chr=1; Num_of_Contigs=14; )
U6   ENSSSCG00000019627 14:108632351-108632455   CT954286,CH242-320B21,14:108628126-108727927
(Clone quality: bE320B21 on chr=14; Num_of_Contigs=3; )
U6   ENSSSCG00000019630 1:275096367-275096472   CU407216,CH242-372F22,1:275095832-275112089
(Clone quality: bE372F22 on chr=1; Num_of_Contigs=8; )
U6   ENSSSCG00000019655 3:52162168-52162274   FP102744,CH242-70H5,3:52154441-52166116
(Clone quality: bE70H5 on chr=3; Num_of_Contigs=11; )
U6   ENSSSCG00000019633 2:133945862-133945968   CU462939,CH242-319A3,2:133896481-133966144
(Clone quality: bE319A3 on chr=2; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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