A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
KIT location ⇒ 8:35813663-35813846   CU929000,CH242-11F18,8:35794265-35835104
(Clone quality: bE11F18 on chr=8; Num_of_Contigs=4; )
KIT location ⇒ 8:35827204-35828106   CU929000,CH242-11F18,8:35794265-35835104
(Clone quality: bE11F18 on chr=8; Num_of_Contigs=4; )
KITLG location ⇒ 5:88012250-88012319   FP102720,CH242-513N15,5:88011022-88014323
(Clone quality: bE513N15 on chr=5; Num_of_Contigs=12; )
KITLG location ⇒ 5:88074156-88074095   FP102720,CH242-513N15,5:88062156-88080262
(Clone quality: bE513N15 on chr=5; Num_of_Contigs=12; )
KITLG location ⇒ 5:88078437-88077994   FP102720,CH242-513N15,5:88062156-88080262
(Clone quality: bE513N15 on chr=5; Num_of_Contigs=12; )
KITLG location ⇒ 5:88133713-88133559   FP102720,CH242-513N15,5:88129110-88144747
(Clone quality: bE513N15 on chr=5; Num_of_Contigs=12; )
KL   ENSSSCG00000009347 11:9173765-9355135    
KLC2   ENSSSCG00000012955 2:4490485-4499873   CU462998,CH242-142J19,2:4485765-4503140
(Clone quality: bE142J19 on chr=2; Num_of_Contigs=8; )
KLC4   ENSSSCG00000001659 7:43967664-43981510 CR956433,CH242-96L23,7:43958429-44038128
(No clone quality info on bE96L23) 		 
KLF1 ENSSSCG00000013730 2:56008241-56011610   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
KLF1 location ⇒ 2:56009628-56009888   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
KLF1 location ⇒ 2:56011319-56011610   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
KLF10 ENSSSCG00000006055 4:34648502-34653813    
KLF10 ENSSSCG00000006057 4:34926495-34932389   CU137730,CH242-38K18,4:34916391-34938052
(Clone quality: bE38K18 on chr=4; Num_of_Contigs=7; )
KLF10 location ⇒ 4:34649167-34648506   CU459197,CH242-257K13,4:34635916-34652852
(Clone quality: bE257K13 on chr=4; Num_of_Contigs=6; )
KLF10 location ⇒ 4:34651177-34650280   CU459197,CH242-257K13,4:34635916-34652852
(Clone quality: bE257K13 on chr=4; Num_of_Contigs=6; )
KLF10 location ⇒ 4:34927160-34926499   CU137730,CH242-38K18,4:34916391-34938052
(Clone quality: bE38K18 on chr=4; Num_of_Contigs=7; )
KLF10 location ⇒ 4:34929170-34928273   CU137730,CH242-38K18,4:34916391-34938052
(Clone quality: bE38K18 on chr=4; Num_of_Contigs=7; )
KLF12   ENSSSCG00000009463 11:45238567-45261399    
KLF13 ENSSSCG00000004842 1:151136184-151179791    
KLF13 location ⇒ 1:151041472-151041705    
KLF13 location ⇒ 1:151136560-151136268   CU570665,CH242-48O19,1:151090472-151150267
(Clone quality: bE48O19 on chr=1; Num_of_Contigs=3; )
KLF13 location ⇒ 1:151179435-151179201   CU570665,CH242-48O19,1:151152675-151269325
(Clone quality: bE48O19 on chr=1; Num_of_Contigs=3; )
KLF13 location ⇒ 1:151179791-151179538   CU570665,CH242-48O19,1:151152675-151269325
(Clone quality: bE48O19 on chr=1; Num_of_Contigs=3; )
KLF3   ENSSSCG00000008775 8:25452471-25474978   FP089508,CH242-63B6,8:25443960-25513271
(Clone quality: bE63B6 on chr=8; Num_of_Contigs=4; )
KLF4 ENSSSCG00000005437 1:261220102-261223590 CU062606,CH242-87M16,1:261173636-261355125
(Clone quality: bE87M16 on chr=1; Num_of_Contigs=5; ) 		 
KLF4 location ⇒ 1:261220630-261220452 CU062606,CH242-87M16,1:261173636-261355125
(Clone quality: bE87M16 on chr=1; Num_of_Contigs=5; ) 		 
KLF4 location ⇒ 1:261222800-261221541 CU062606,CH242-87M16,1:261173636-261355125
(Clone quality: bE87M16 on chr=1; Num_of_Contigs=5; ) 		 
KLF4 location ⇒ 1:261223563-261223465 CU062606,CH242-87M16,1:261173636-261355125
(Clone quality: bE87M16 on chr=1; Num_of_Contigs=5; ) 		 
KLF5 ENSSSCG00000009462 11:44596280-44731528    
KLF5 location ⇒ 11:44485792-44485613   CU606922,CH242-241E10,11:44483322-44495431
(Clone quality: bE241E10 on chr=11; Num_of_Contigs=8; )
KLF5 location ⇒ 11:44598966-44599411    
KLF5 location ⇒ 11:44717846-44718276    
KLF5 location ⇒ 11:44731230-44731409   CU861642,CH242-81P7,11:44717846-44735711
(Clone quality: bE81P7 on chr=11; Num_of_Contigs=4; )
KLF9 ENSSSCG00000005254 1:234047725-234071076    
KLF9 ENSSSCG00000005256 1:234218917-234243006   CU571144,CH242-60M1,1:234195896-234249786
(Clone quality: bE60M1 on chr=1; Num_of_Contigs=7; )
KLF9 location ⇒ 1:234047725-234048231   CU074416,CH242-91G16,1:234041212-234048326
(Clone quality: bE91G16 on chr=1; Num_of_Contigs=6; )
KLF9 location ⇒ 1:234070845-234071076   CU074416,CH242-91G16,1:234064688-234077066
(Clone quality: bE91G16 on chr=1; Num_of_Contigs=6; )
KLF9 location ⇒ 1:234219148-234218917   CU571144,CH242-60M1,1:234195896-234249786
(Clone quality: bE60M1 on chr=1; Num_of_Contigs=7; )
KLF9 location ⇒ 1:234243006-234242500   CU571144,CH242-60M1,1:234195896-234249786
(Clone quality: bE60M1 on chr=1; Num_of_Contigs=7; )
KLHDC1   ENSSSCG00000005010 1:187961561-188025679   CU633539,CH242-147E14,1:187955233-188036811
(Clone quality: bE147E14 on chr=1; Num_of_Contigs=4; )
KLHDC10   ENSSSCG00000016561 18:16804367-16817426   CU655939,CH242-371G20,18:16767549-16826115
(Clone quality: bE371G20 on chr=18; Num_of_Contigs=7; )
KLHDC2   ENSSSCG00000005009 1:187949667-188038624    
KLHDC3   ENSSSCG00000001656 7:43927800-43941527 CR956379,CH242-196P11,7:43779717-43958428
(No clone quality info on bE196P11) 		 
KLHDC4   ENSSSCG00000002652 6:558798-568734    
KLHDC5   ENSSSCG00000000545 5:44511365-44530759    
KLHDC6   ENSSSCG00000011622 13:59832413-59885134    
KLHDC7B   ENSSSCG00000000960 5:99599747-99690605    
KLHDC8B   ENSSSCG00000011379 13:26780282-26783900   CU856115,CH242-45E6,13:26748496-26786404
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
KLHDC9   ENSSSCG00000006367 4:92850323-92852416   CU463216,CH242-293N2,4:92828593-92858602
(Clone quality: bE293N2 on chr=4; Num_of_Contigs=6; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-1

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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