A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LMLN ENSSSCG00000011857 13:101350741-101362549 CU694544,CH242-123C16,13:101156837-101363233
(Clone quality: bE123C16 on chr=13; Num_of_Contigs=6; ) 		 
LMLN location ⇒ 13:101350770-101350961 CU694544,CH242-123C16,13:101156837-101363233
(Clone quality: bE123C16 on chr=13; Num_of_Contigs=6; ) 		 
LMLN location ⇒ 13:101358974-101359075 CU694544,CH242-123C16,13:101156837-101363233
(Clone quality: bE123C16 on chr=13; Num_of_Contigs=6; ) 		 
LMLN location ⇒ 13:101361850-101361929 CU694544,CH242-123C16,13:101156837-101363233
(Clone quality: bE123C16 on chr=13; Num_of_Contigs=6; ) 		 
LMNA   ENSSSCG00000006496 4:97845353-97865336   CU302298,CH242-261P14,4:97812098-97896758
(Clone quality: bE261P14 on chr=4; Num_of_Contigs=4; )
LMO1 location ⇒ 5:53768973-53769115   CU915363,CH242-476M7,5:53766364-53773004
(Clone quality: bE476M7 on chr=5; Num_of_Contigs=12; )
LMO2 ENSSSCG00000013307 2:25453803-25464458 CU463884,CH242-311M11,2:25413051-25615449
(Clone quality: bE311M11 on chr=2; Num_of_Contigs=2; ) 		 
LMO2 location ⇒ 2:25463938-25464548 CU463884,CH242-311M11,2:25413051-25615449
(Clone quality: bE311M11 on chr=2; Num_of_Contigs=2; ) 		 
LMO3   ENSSSCG00000000597 5:53686398-53696415    
LMO4 ENSSSCG00000006928 4:133891696-133906863    
LMO7   ENSSSCG00000009467 11:46983287-47022830    
LMOD1   ENSSSCG00000010918 10:24311701-24340240   CU896694,CH242-111D22,10:24267978-24372745
(Clone quality: bE111D22 on chr=10; Num_of_Contigs=6; )
LMOD2   ENSSSCG00000016605 18:21957036-21965527 CU442752,CH242-52J8,18:21802381-21975792
(Clone quality: bE52J8 on chr=18; Num_of_Contigs=4; ) 		 
LMOD3   ENSSSCG00000011508 13:42362085-42374717   CU856699,CH242-303A24,13:42342465-42380895
(Clone quality: bE303A24 on chr=13; Num_of_Contigs=5; )
LMTK2   ENSSSCG00000007599 3:4532548-4614581    
LMX1A   ENSSSCG00000006329 4:89013343-89176135    
LMX1B   ENSSSCG00000005606 1:281645723-281651522   CU062602,CH242-86E10,1:281632031-281656796
(Clone quality: bE86E10 on chr=1; Num_of_Contigs=10; )
LNP1   ENSSSCG00000011964 13:116500631-116519460    
LNPEP ENSSSCG00000014173 2:92659673-92752617    
LNPEP location ⇒ 2:92696155-92696803   CU463957,CH242-355F23,2:92636562-92731350
(Clone quality: bE355F23 on chr=2; Num_of_Contigs=3; )
LNX1   ENSSSCG00000008838 8:34629526-34740040    
LNX2   ENSSSCG00000009308 11:4144670-4180545    
LOC100045846 location ⇒ 9:32445492-32445602   CU639456,CH242-236M19,9:32375977-32501103
(Clone quality: bE236M19 on chr=9; Num_of_Contigs=2; )
LOC100045846 location ⇒ 9:32464750-32464816   CU639456,CH242-236M19,9:32375977-32501103
(Clone quality: bE236M19 on chr=9; Num_of_Contigs=2; )
LOC100045846 location ⇒ 9:32469846-32469924   CU639456,CH242-236M19,9:32375977-32501103
(Clone quality: bE236M19 on chr=9; Num_of_Contigs=2; )
LOC100045846 location ⇒ 9:32524657-32524808   CU639456,CH242-236M19,9:32501204-32548762
(Clone quality: bE236M19 on chr=9; Num_of_Contigs=2; )
LOC100129781 location ⇒ 3:26355831-26356196   CU466495,CH242-483B24,3:26343958-26385410
(Clone quality: bE483B24 on chr=3; Num_of_Contigs=15; )
LOC100129781 location ⇒ 3:26406927-26406867   CU896561,CH242-61G18,3:26405963-26409695
(Clone quality: bE61G18 on chr=3; Num_of_Contigs=16; )
LOC100133846 location ⇒ X:11343109-11343190 CU633586,CH242-423M21,X:11281835-11399819
(Clone quality: bE423M21 on chr=X; Num_of_Contigs=2; ) 		 
LOC100133846 location ⇒ X:11350783-11350956 CU633586,CH242-423M21,X:11281835-11399819
(Clone quality: bE423M21 on chr=X; Num_of_Contigs=2; ) 		 
LOC100133846 location ⇒ X:11354062-11354279 CU633586,CH242-423M21,X:11281835-11399819
(Clone quality: bE423M21 on chr=X; Num_of_Contigs=2; ) 		 
LOC100133846 location ⇒ X:11360290-11360448 CU633586,CH242-423M21,X:11281835-11399819
(Clone quality: bE423M21 on chr=X; Num_of_Contigs=2; ) 		 
LOC100134323 location ⇒ 13:139063848-139063748   CU633276,CH242-336P19,13:139057097-139068063
(Clone quality: bE336P19 on chr=13; Num_of_Contigs=11; )
LOC100139105 location ⇒ 2:52313966-52314215   CU855518,CH242-272A5,2:52305877-52317098
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
LOC100139105 location ⇒ 2:52322546-52322609   CU855518,CH242-272A5,2:52317199-52337804
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
LOC100139105 location ⇒ 2:62357471-62357388   CU915655,CH242-228H4,2:62349388-62376255
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
LOC100139105 location ⇒ 2:62358453-62358380   CU915655,CH242-228H4,2:62349388-62376255
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
LOC100152258 ENSSSCG00000011540 13:54816916-55014949    
LOC100152258 location ⇒ 13:1004139-1004046   CU633332,CH242-130E2,13:950202-1062148
(Clone quality: bE130E2 on chr=13; Num_of_Contigs=3; )
LOC100152258 location ⇒ 13:1918221-1918314   FP003587,CH242-127D11,13:1856315-1986266
(Clone quality: bE127D11 on chr=13; Num_of_Contigs=2; )
LOC100152258 location ⇒ 13:3104639-3104704   CU928574,CH242-45O21,13:3075253-3152029
(Clone quality: bE45O21 on chr=13; Num_of_Contigs=2; )
LOC100152258 location ⇒ 13:40399-40318   CU928239,CH242-498F20,13:34625-47986
(Clone quality: bE498F20 on chr=13; Num_of_Contigs=4; )
LOC100152603 ENSSSCG00000016308 15:126701340-126715875   CU469272,CH242-375M5,15:126699458-126718184
(Clone quality: bE375M5 on chr=15; Num_of_Contigs=14; )
LOC100152603 location ⇒ 15:119281-119346   FP236224,CH242-441A13,15:115658-143661
(Clone quality: bE441A13 on chr=15; Num_of_Contigs=3; )
LOC100152603 location ⇒ 15:1611301-1611232   CU694702,CH242-278B7,15:1607758-1629587
(Clone quality: bE278B7 on chr=15; Num_of_Contigs=10; )
LOC100152603 location ⇒ 15:255294-255186   CU855564,CH242-275M1,15:252265-260350
(Clone quality: bE275M1 on chr=15; Num_of_Contigs=7; )
LOC100152603 location ⇒ 15:988542-988477   CU855629,CH242-138C11,15:923238-993627
(Clone quality: bE138C11 on chr=15; Num_of_Contigs=4; )
LOC100154567 ENSSSCG00000004105 1:17234332-17248548   CU571230,CH242-42L8,1:17232467-17263259
(Clone quality: bE42L8 on chr=1; Num_of_Contigs=10; )
LOC100154567 location ⇒ 1:3030423-3030299   CU914391,CH242-90K24,1:3007712-3030423
(Clone quality: bE90K24 on chr=1; Num_of_Contigs=9; )
LOC100154567 location ⇒ 1:677608-677697   CU633311,CH242-59H8,1:670694-687986
(Clone quality: bE59H8 on chr=1; Num_of_Contigs=14; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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