A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 15601 - 15700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
CDH17 location ⇒ 4:43148802-43148942   CU407285,CH242-511L5,4:43142016-43234568
(Clone quality: bE511L5 on chr=4; Num_of_Contigs=2; )
CDH17 location ⇒ 4:43149813-43149955   CU407285,CH242-511L5,4:43142016-43234568
(Clone quality: bE511L5 on chr=4; Num_of_Contigs=2; )
CDH17 location ⇒ 4:43159990-43160152   CU407285,CH242-511L5,4:43142016-43234568
(Clone quality: bE511L5 on chr=4; Num_of_Contigs=2; )
CDH18 location ⇒ 16:7612636-7612072   FP074865,CH242-399A18,16:7601231-7628812
(Clone quality: bE399A18 on chr=16; Num_of_Contigs=11; )
CDH19 location ⇒ 1:162680092-162680519   CU062608,CH242-88B5,1:162658778-162754263
(Clone quality: bE88B5 on chr=1; Num_of_Contigs=8; )
CDH2 location ⇒ 6:77983689-77983829   CU329675,CH242-402B12,6:77982131-77989451
(Clone quality: bE402B12 on chr=6; Num_of_Contigs=21; )
CDH2 location ⇒ 6:78001496-78001327   CU329675,CH242-402B12,6:77996796-78004420
(Clone quality: bE402B12 on chr=6; Num_of_Contigs=21; )
CDH20 location ⇒ 1:166726803-166726973   FP090891,CH242-127N5,1:166669322-166736579
(Clone quality: bE127N5 on chr=1; Num_of_Contigs=4; )
CDH20 location ⇒ 1:166730464-166730586   FP090891,CH242-127N5,1:166669322-166736579
(Clone quality: bE127N5 on chr=1; Num_of_Contigs=4; )
CDH20 location ⇒ 1:166731144-166731393   FP090891,CH242-127N5,1:166669322-166736579
(Clone quality: bE127N5 on chr=1; Num_of_Contigs=4; )
CDH20 location ⇒ 1:166906627-166906377   CU633360,CH242-197J3,1:166904488-166907527
(Clone quality: bE197J3 on chr=1; Num_of_Contigs=9; )
CDH22 location ⇒ 17:50438577-50438702   CU407253,CH242-446C24,17:50437561-50453801
(Clone quality: bE446C24 on chr=17; Num_of_Contigs=11; )
CDH22 location ⇒ 17:50451470-50451767   CU407253,CH242-446C24,17:50437561-50453801
(Clone quality: bE446C24 on chr=17; Num_of_Contigs=11; )
CDH22 location ⇒ 17:50459948-50460125   CU407253,CH242-446C24,17:50453902-50460365
(Clone quality: bE446C24 on chr=17; Num_of_Contigs=11; )
CDH22 location ⇒ 17:50460154-50460296   CU407253,CH242-446C24,17:50453902-50460365
(Clone quality: bE446C24 on chr=17; Num_of_Contigs=11; )
CDH23 location ⇒ 14:77836809-77836964   CT954215,CH242-341I21,14:77695739-77877008
(Clone quality: bE341I21 on chr=14; Num_of_Contigs=1; )
CDH23 location ⇒ 14:77838047-77838180   CT954215,CH242-341I21,14:77695739-77877008
(Clone quality: bE341I21 on chr=14; Num_of_Contigs=1; )
CDH23 location ⇒ 14:77839406-77839536   CT954215,CH242-341I21,14:77695739-77877008
(Clone quality: bE341I21 on chr=14; Num_of_Contigs=1; )
CDH23 location ⇒ 14:77840252-77840582   CT954215,CH242-341I21,14:77695739-77877008
(Clone quality: bE341I21 on chr=14; Num_of_Contigs=1; )
CDH24 location ⇒ 7:82383758-82383945   CU468526,CH242-14D10,7:82382718-82403264
(Clone quality: bE14D10 on chr=7; Num_of_Contigs=8; )
CDH24 location ⇒ 7:82384254-82384511   CU468526,CH242-14D10,7:82382718-82403264
(Clone quality: bE14D10 on chr=7; Num_of_Contigs=8; )
CDH24 location ⇒ 7:82385744-82385875   CU468526,CH242-14D10,7:82382718-82403264
(Clone quality: bE14D10 on chr=7; Num_of_Contigs=8; )
CDH26 location ⇒ 17:62606681-62606762   CU915385,CH242-197I13,17:62578020-62643589
(Clone quality: bE197I13 on chr=17; Num_of_Contigs=8; )
CDH4 location ⇒ 6:77972598-77972715   CU329675,CH242-402B12,6:77970576-77976274
(Clone quality: bE402B12 on chr=6; Num_of_Contigs=21; )
CDH4 location ⇒ 6:77973378-77973563   CU329675,CH242-402B12,6:77970576-77976274
(Clone quality: bE402B12 on chr=6; Num_of_Contigs=21; )
CDH4 location ⇒ 6:77976375-77976560    
CDH6 location ⇒ 16:15400048-15400160   FP003585,CH242-122L12,16:15393136-15455780
(Clone quality: bE122L12 on chr=16; Num_of_Contigs=5; )
CDH6 location ⇒ 16:15534652-15534359   FP003585,CH242-122L12,16:15492559-15575994
(Clone quality: bE122L12 on chr=16; Num_of_Contigs=5; )
CDH6 location ⇒ 16:15560869-15560511   FP003585,CH242-122L12,16:15492559-15575994
(Clone quality: bE122L12 on chr=16; Num_of_Contigs=5; )
CDH7 location ⇒ 1:163280956-163280833   CU074302,CH242-156A7,1:163241095-163326045
(Clone quality: bE156A7 on chr=1; Num_of_Contigs=3; )
CDH7 location ⇒ 1:163284035-163283864   CU074302,CH242-156A7,1:163241095-163326045
(Clone quality: bE156A7 on chr=1; Num_of_Contigs=3; )
CDH7 location ⇒ 1:163291748-163291627   CU074302,CH242-156A7,1:163241095-163326045
(Clone quality: bE156A7 on chr=1; Num_of_Contigs=3; )
CDH7 location ⇒ 1:163297342-163297252   CU074302,CH242-156A7,1:163241095-163326045
(Clone quality: bE156A7 on chr=1; Num_of_Contigs=3; )
CDK2 location ⇒ 5:20332627-20332869    
CDK2 location ⇒ 5:20335148-20335323   CU457395,CH242-13B13,5:20332627-20335712
(Clone quality: bE13B13 on chr=5; Num_of_Contigs=23; )
CDK2 location ⇒ 5:20337338-20337542   CU457395,CH242-13B13,5:20335813-20343473
(Clone quality: bE13B13 on chr=5; Num_of_Contigs=23; )
CDK2 location ⇒ 5:20337819-20338189   CU457395,CH242-13B13,5:20335813-20343473
(Clone quality: bE13B13 on chr=5; Num_of_Contigs=23; )
CDK3 location ⇒ 12:3787274-3787070   CU928029,CH242-304M1,12:3750666-3894443
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
CDK3 location ⇒ 12:3787666-3787561   CU928029,CH242-304M1,12:3750666-3894443
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
CDK3 location ⇒ 12:3787922-3787748   CU928029,CH242-304M1,12:3750666-3894443
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
CDK4 location ⇒ 5:21902079-21901908   CU914582,CH242-235E14,5:21901770-21904026
(Clone quality: bE235E14 on chr=5; Num_of_Contigs=33; )
CDK4 location ⇒ 5:21902728-21902489   CU914582,CH242-235E14,5:21901770-21904026
(Clone quality: bE235E14 on chr=5; Num_of_Contigs=33; )
CDK4 location ⇒ 5:21903388-21903171   CU914582,CH242-235E14,5:21901770-21904026
(Clone quality: bE235E14 on chr=5; Num_of_Contigs=33; )
CDK4 location ⇒ 5:21967108-21967503   CU914582,CH242-235E14,5:21966566-21968744
(Clone quality: bE235E14 on chr=5; Num_of_Contigs=33; )
CDK6 location ⇒ 9:67904995-67904759   FP102994,CH242-279H20,9:67872880-67942919
(Clone quality: bE279H20 on chr=9; Num_of_Contigs=1; )
CDK6 location ⇒ 9:67905604-67905251   FP102994,CH242-279H20,9:67872880-67942919
(Clone quality: bE279H20 on chr=9; Num_of_Contigs=1; )
CDK6 location ⇒ 9:68223467-68223223   CU856662,CH242-305E15,9:68222853-68225091
(Clone quality: bE305E15 on chr=9; Num_of_Contigs=5; )
CDK6 location ⇒ 9:68223823-68223532   CU856662,CH242-305E15,9:68222853-68225091
(Clone quality: bE305E15 on chr=9; Num_of_Contigs=5; )
CDK7 location ⇒ 16:44731322-44731132   FP085444,CH242-185P14,16:44727312-44749875
(Clone quality: bE185P14 on chr=16; Num_of_Contigs=5; )
CDK7 location ⇒ 16:44731846-44731696   FP085444,CH242-185P14,16:44727312-44749875
(Clone quality: bE185P14 on chr=16; Num_of_Contigs=5; )
CDK7 location ⇒ 16:44734729-44734579   FP085444,CH242-185P14,16:44727312-44749875
(Clone quality: bE185P14 on chr=16; Num_of_Contigs=5; )
CDK7 location ⇒ 16:44756998-44756821   FP085444,CH242-185P14,16:44749976-44763467
(Clone quality: bE185P14 on chr=16; Num_of_Contigs=5; )
CDKN1A location ⇒ 7:36987623-36987708 CU326356,CH242-61G11,7:36975834-37183903
(Clone quality: bE61G11 on chr=7; Num_of_Contigs=4; )
 
CDKN1A location ⇒ 7:36992376-36992833 CU326356,CH242-61G11,7:36975834-37183903
(Clone quality: bE61G11 on chr=7; Num_of_Contigs=4; )
 
CDKN1A location ⇒ 7:36992563-36992752 CU326356,CH242-61G11,7:36975834-37183903
(Clone quality: bE61G11 on chr=7; Num_of_Contigs=4; )
 
CDKN1A location ⇒ 7:36995154-36996704 CU326356,CH242-61G11,7:36975834-37183903
(Clone quality: bE61G11 on chr=7; Num_of_Contigs=4; )
 
CDKN2A location ⇒ 1:209501880-209502128   CU915634,CH242-510N24,1:209483379-209504275
(Clone quality: bE510N24 on chr=1; Num_of_Contigs=8; )
CDKN2A location ⇒ 1:209515657-209515403   CU915634,CH242-510N24,1:209509548-209517332
(Clone quality: bE510N24 on chr=1; Num_of_Contigs=8; )
CDKN2A location ⇒ 1:209529405-209529354   CU915634,CH242-510N24,1:209528899-209535205
(Clone quality: bE510N24 on chr=1; Num_of_Contigs=8; )
CDKN2A location ⇒ 1:209532177-209531868   CU915634,CH242-510N24,1:209528899-209535205
(Clone quality: bE510N24 on chr=1; Num_of_Contigs=8; )
CDKN2B location ⇒ 1:209499306-209499470   CU915634,CH242-510N24,1:209483379-209504275
(Clone quality: bE510N24 on chr=1; Num_of_Contigs=8; )
CDKN2B location ⇒ 1:209501880-209502170   CU915634,CH242-510N24,1:209483379-209504275
(Clone quality: bE510N24 on chr=1; Num_of_Contigs=8; )
CDKN2B location ⇒ 1:209532177-209531929   CU915634,CH242-510N24,1:209528899-209535205
(Clone quality: bE510N24 on chr=1; Num_of_Contigs=8; )
CDKN2C location ⇒ 6:114986598-114985449   FP015924,CH242-136C1,6:114963846-114998258
(Clone quality: bE136C1 on chr=6; Num_of_Contigs=9; )
CDKN2C location ⇒ 6:114990125-114989982   FP015924,CH242-136C1,6:114963846-114998258
(Clone quality: bE136C1 on chr=6; Num_of_Contigs=9; )
CDKN2C location ⇒ 6:114990977-114990577   FP015924,CH242-136C1,6:114963846-114998258
(Clone quality: bE136C1 on chr=6; Num_of_Contigs=9; )
CDKN2D location ⇒ 2:52949963-52950365   CU993813,CH242-86K24,2:52943491-52988729
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
CDKN2D location ⇒ 2:52951386-52952344   CU993813,CH242-86K24,2:52943491-52988729
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
CDKN3 location ⇒ 1:192403410-192403484   CU074294,CH242-134E21,1:192395025-192414617
(Clone quality: bE134E21 on chr=1; Num_of_Contigs=4; )
CDKN3 location ⇒ 1:192405085-192405143   CU074294,CH242-134E21,1:192395025-192414617
(Clone quality: bE134E21 on chr=1; Num_of_Contigs=4; )
CDKN3 location ⇒ 1:192408337-192408562   CU074294,CH242-134E21,1:192395025-192414617
(Clone quality: bE134E21 on chr=1; Num_of_Contigs=4; )
CDKN3 location ⇒ 1:192415444-192415679   CU074294,CH242-134E21,1:192414718-192423212
(Clone quality: bE134E21 on chr=1; Num_of_Contigs=4; )
CEACAM1 location ⇒ 6:34003800-34004564   FP236582,CH242-238L13,6:33993771-34008076
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
CEACAM1 location ⇒ 6:34760830-34760691   FP015926,CH242-183C8,6:34727569-34762148
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
CEACAM1 location ⇒ 6:34761789-34761094   FP015926,CH242-183C8,6:34727569-34762148
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
CEACAM16 location ⇒ 6:35737779-35737359   CU929755,CH242-284D18,6:35720744-35751410
(Clone quality: bE284D18 on chr=6; Num_of_Contigs=4; )
CEACAM16 location ⇒ 6:35740168-35739877   CU929755,CH242-284D18,6:35720744-35751410
(Clone quality: bE284D18 on chr=6; Num_of_Contigs=4; )
CEACAM19 location ⇒ 6:35586764-35586669   CU929755,CH242-284D18,6:35579071-35587157
(Clone quality: bE284D18 on chr=6; Num_of_Contigs=4; )
CEACAM19 location ⇒ 6:35589495-35589346   CU929755,CH242-284D18,6:35587258-35702275
(Clone quality: bE284D18 on chr=6; Num_of_Contigs=4; )
CEACAM21 location ⇒ 6:34696962-34697029   FP015926,CH242-183C8,6:34688844-34702901
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
CEACAM3 location ⇒ 6:33981425-33981586   FP236582,CH242-238L13,6:33980588-33985267
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
CEACAM3 location ⇒ 6:33982893-33983255   FP236582,CH242-238L13,6:33980588-33985267
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
CEACAM3 location ⇒ 6:34707720-34707559   FP015926,CH242-183C8,6:34703002-34716887
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
CEACAM3 location ⇒ 6:34837139-34837500   FP102750,CH242-80G20,6:34836564-34839126
(Clone quality: bE80G20 on chr=6; Num_of_Contigs=9; )
CEACAM6 location ⇒ 6:33981409-33981586   FP236582,CH242-238L13,6:33980588-33985267
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
CEACAM6 location ⇒ 6:33982893-33983250   FP236582,CH242-238L13,6:33980588-33985267
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
CEACAM6 location ⇒ 6:34707736-34707559   FP015926,CH242-183C8,6:34703002-34716887
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
CEACAM6 location ⇒ 6:34837139-34837495   FP102750,CH242-80G20,6:34836564-34839126
(Clone quality: bE80G20 on chr=6; Num_of_Contigs=9; )
CEACAM7 location ⇒ 6:33981412-33981586   FP236582,CH242-238L13,6:33980588-33985267
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
CEACAM7 location ⇒ 6:34707733-34707559   FP015926,CH242-183C8,6:34703002-34716887
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
CEACAM7 location ⇒ 6:34837139-34837443   FP102750,CH242-80G20,6:34836564-34839126
(Clone quality: bE80G20 on chr=6; Num_of_Contigs=9; )
CEBPA location ⇒ 6:28811480-28811117   CU929902,CH242-260F18,6:28809182-28963405
(Clone quality: bE260F18 on chr=6; Num_of_Contigs=2; )
CEBPB location ⇒ 17:53740250-53740434   CU682662,CH242-263E16,17:53739677-53791812
(Clone quality: bE263E16 on chr=17; Num_of_Contigs=5; )
CEBPB location ⇒ 17:53740643-53740800   CU682662,CH242-263E16,17:53739677-53791812
(Clone quality: bE263E16 on chr=17; Num_of_Contigs=5; )
CEBPB location ⇒ 17:53740928-53741390   CU682662,CH242-263E16,17:53739677-53791812
(Clone quality: bE263E16 on chr=17; Num_of_Contigs=5; )
CEBPB location ⇒ 17:53741556-53741826   CU682662,CH242-263E16,17:53739677-53791812
(Clone quality: bE263E16 on chr=17; Num_of_Contigs=5; )
CEBPD location ⇒ 4:82893745-82894022   CU468820,CH242-166J20,4:82887998-82899500
(Clone quality: bE166J20 on chr=4; Num_of_Contigs=10; )
CEBPD location ⇒ 4:82894089-82894188   CU468820,CH242-166J20,4:82887998-82899500
(Clone quality: bE166J20 on chr=4; Num_of_Contigs=10; )
CEBPD location ⇒ 4:82894271-82894517   CU468820,CH242-166J20,4:82887998-82899500
(Clone quality: bE166J20 on chr=4; Num_of_Contigs=10; )
CEBPD location ⇒ 4:82894570-82895276   CU468820,CH242-166J20,4:82887998-82899500
(Clone quality: bE166J20 on chr=4; Num_of_Contigs=10; )
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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