A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 3301 - 3400:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
CYB5B   ENSSSCG00000002756 6:12423115-12458561   FP015939,CH242-384D23,6:12371411-12465501
(Clone quality: bE384D23 on chr=6; Num_of_Contigs=2; )
CYB5D2   ENSSSCG00000017876 12:47432754-47441760    
CYB5R1   ENSSSCG00000010929 10:24925344-24930635    
CYB5R3 ENSSSCG00000000038 5:2835494-2858808    
CYBASC3 ENSSSCG00000013086 2:8448893-8462310    
CYBB ENSSSCG00000012229 X:33096182-33133043    
CYBRD1   ENSSSCG00000015946 15:72724087-72738643   CU571010,CH242-167N10,15:72721073-72758631
(Clone quality: bE167N10 on chr=15; Num_of_Contigs=10; )
CYC1   ENSSSCG00000005913 4:584181-586642   FP085492,CH242-176F2,4:573710-645862
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
CYFIP2   ENSSSCG00000017054 16:63538236-63619797    
CYGB   ENSSSCG00000017173 12:3213957-3220562   FP009759,CH242-6N4,12:3213783-3222661
(Clone quality: bE6N4 on chr=12; Num_of_Contigs=14; )
CYHR1   ENSSSCG00000005903 4:449645-462836    
CYLC1   ENSSSCG00000012455 X:66202173-66207076   CU694935,CH242-69C23,X:66141805-66238682
(Clone quality: bE69C23 on chr=X; Num_of_Contigs=7; )
CYLC2 ENSSSCG00000005401 1:255957346-255961469    
CYLD   ENSSSCG00000002837 6:23706695-23882754    
CYP ENSSSCG00000003664 6:65624698-65639794 CR956427,CH242-51O7,6:65474974-65651225
(No clone quality info on bE51O7) 		 
CYP ENSSSCG00000003964 6:120933170-120951473   CU467721,CH242-292B22,6:120927206-120962427
(Clone quality: bE292B22 on chr=6; Num_of_Contigs=5; )
CYP ENSSSCG00000004557 1:111189586-111195194   CU302261,CH242-182N21,1:111189543-111264608
(Clone quality: bE182N21 on chr=1; Num_of_Contigs=3; )
CYP ENSSSCG00000008878 8:41236401-41250927   CU896689,CH242-1N13,8:41180262-41282411
(Clone quality: bE1N13 on chr=8; Num_of_Contigs=4; )
CYP ENSSSCG00000010083 14:51283055-51306558   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
CYP ENSSSCG00000010330 14:85205810-85212642   CT827949,CH242-259N24,14:85046239-85223409
(Clone quality: bE259N24 on chr=14; Num_of_Contigs=1; )
CYP ENSSSCG00000015934 15:71377171-71407147    
CYP17A1 ENSSSCG00000010591 14:118882237-118888672   CU570855,CH242-447M15,14:118871202-118888810
(Clone quality: bE447M15 on chr=14; Num_of_Contigs=8; )
CYP1A1 ENSSSCG00000001906 7:64454785-64461043   CU469022,CH242-37P17,7:64436456-64477953
(Clone quality: bE37P17 on chr=7; Num_of_Contigs=3; )
CYP1A2   ENSSSCG00000001901 7:64280270-64285232   CU468845,CH242-162A4,7:64176153-64332301
(Clone quality: bE162A4 on chr=7; Num_of_Contigs=2; )
CYP1B1 ENSSSCG00000008489 3:95306777-95307367   CU896570,CH242-142J2,3:95288561-95309682
(Clone quality: bE142J2 on chr=3; Num_of_Contigs=8; )
CYP21A2 ENSSSCG00000001428 7:27908299-27911241 CT956038,CH242-183N12,7:27767223-27953076
(Clone quality: bE183N12 on chr=7; Num_of_Contigs=3; ) 		 
CYP24A1   ENSSSCG00000007486 17:57339613-57360530 CR956635,CH242-184L20,17:57161867-57371607
(No clone quality info on bE184L20) 		 
CYP26A1 ENSSSCG00000010475 14:109670849-109674324   CT827851,CH242-289B12,14:109662353-109720416
(Clone quality: bE289B12 on chr=14; Num_of_Contigs=7; )
CYP26B1 ENSSSCG00000008311 3:64757607-64774508    
CYP26C1 ENSSSCG00000010474 14:109659829-109666189    
CYP27A1   ENSSSCG00000016199 15:113821914-113824354    
CYP2B6 ENSSSCG00000003006 6:33882573-33906774    
CYP2B7P1 ENSSSCG00000003006 6:33882573-33906774    
CYP2E1   ENSSSCG00000010780 14:148132846-148145308   CU582843,CH242-221E3,14:148105591-148151995
(Clone quality: bE221E3 on chr=14; Num_of_Contigs=12; )
CYP2F1   ENSSSCG00000002994 6:33650186-33662178    
CYP2J2 ENSSSCG00000003825 6:107693667-107723360    
CYP2R1   ENSSSCG00000013389 2:41501759-41519677   CU606994,CH242-513N24,2:41487352-41529702
(Clone quality: bE513N24 on chr=2; Num_of_Contigs=5; )
CYP2U1   ENSSSCG00000009151 8:97852755-97869047   CU463204,CH242-487A14,8:97767700-97882787
(Clone quality: bE487A14 on chr=8; Num_of_Contigs=2; )
CYP2W1   ENSSSCG00000007549 3:426367-431382   CU928365,CH242-185G1,3:426338-433376
(Clone quality: bE185G1 on chr=3; Num_of_Contigs=21; )
CYP46A1   ENSSSCG00000002510 7:129916145-129979541    
CYP4B1   ENSSSCG00000003894 6:117760201-117779328   FP102856,CH242-411M18,6:117731449-117792877
(Clone quality: bE411M18 on chr=6; Num_of_Contigs=16; )
CYP4V2   ENSSSCG00000015800 15:44229729-44232929   CU466336,CH242-451P14,15:44219570-44237229
(Clone quality: bE451P14 on chr=15; Num_of_Contigs=7; )
CYP51A1   ENSSSCG00000015311 9:67541228-67562863   CU856027,CH242-272P11,9:67469412-67568808
(Clone quality: bE272P11 on chr=9; Num_of_Contigs=6; )
CYP7A1   ENSSSCG00000006238 4:77173363-77202771    
CYP7B1   ENSSSCG00000006221 4:72197760-72353680    
CYR61 ENSSSCG00000006940 4:135349745-135352503   CU302351,CH242-235J1,4:135274335-135442929
(Clone quality: bE235J1 on chr=4; Num_of_Contigs=3; )
CYSLTR1 ENSSSCG00000012443 X:61853427-61854449   FP236267,CH242-520A13,X:61848885-61869807
(Clone quality: bE520A13 on chr=X; Num_of_Contigs=18; )
CYSLTR2 ENSSSCG00000009399 11:18443351-18444289    
CYTH1   ENSSSCG00000017167 12:1975893-2044159 CU942393,CH242-200M2,12:1864056-2044534
(Clone quality: bE200M2 on chr=14; Num_of_Contigs=6; ) 		 
CYTH2   ENSSSCG00000003136 6:37497074-37506716    
CYTH4   ENSSSCG00000000130 5:6883939-6914392   CU915640,CH242-153F17,5:6859806-6948922
(Clone quality: bE153F17 on chr=5; Num_of_Contigs=5; )
CYTSA   ENSSSCG00000010053 14:50407704-50505710    
CYYR1   ENSSSCG00000012024 13:135830477-135843348   CU550653,CH242-147K14,13:135766436-135852706
(Clone quality: bE147K14 on chr=13; Num_of_Contigs=7; )
DAAM1   ENSSSCG00000005078 1:197289158-197399635    
DAAM2   ENSSSCG00000001595 7:40300869-40354344    
DAB1   ENSSSCG00000003833 6:110066302-110217991    
DAB2   ENSSSCG00000016857 16:21934596-22030455    
DAB2IP   ENSSSCG00000005524 1:275494746-275509005   CU915410,CH242-31P10,1:275494128-275511355
(Clone quality: bE31P10 on chr=1; Num_of_Contigs=8; )
DACH1   ENSSSCG00000009457 11:43155733-43392023    
DACH2   ENSSSCG00000012464 X:68342129-68792554    
DAD1 ENSSSCG00000002050 7:82682146-82707576   CU407030,CH242-171E18,7:82670262-82752637
(Clone quality: bE171E18 on chr=7; Num_of_Contigs=3; )
DAGLA   ENSSSCG00000013079 2:8056543-8079221    
DAK   ENSSSCG00000013087 2:8464593-8477980    
DALRD3   ENSSSCG00000011370 13:26601027-26606452   CU466318,CH242-524L17,13:26598779-26606793
(Clone quality: bE524L17 on chr=13; Num_of_Contigs=16; )
DAND5   ENSSSCG00000013741 2:56138308-56142589   CU463133,CH242-121E19,2:56137209-56155099
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
DAO   ENSSSCG00000009942 14:42186035-42205117   CT954284,CH242-241M1,14:42019840-42206297
(Clone quality: bE241M1 on chr=14; Num_of_Contigs=1; )
DAP3 ENSSSCG00000006507 4:98171360-98372776    
DAPK1 ENSSSCG00000010949 10:26963449-27001282    
DAPK2 ENSSSCG00000004560 1:111424027-111462238    
DAPL1   ENSSSCG00000013810 2:59018449-59019336   FP102498,CH242-323J5,2:59014071-59094738
(Clone quality: bE323J5 on chr=2; Num_of_Contigs=2; )
DAPP1 ENSSSCG00000009175 8:103264180-103289427   FP089503,CH242-496N9,8:103261529-103367524
(Clone quality: bE496N9 on chr=8; Num_of_Contigs=4; )
DARC ENSSSCG00000006416 4:94777387-94778855   CU462834,CH242-199I10,4:94761474-94795889
(Clone quality: bE199I10 on chr=4; Num_of_Contigs=5; )
DARS   ENSSSCG00000015689 15:14296947-14371534    
DAXX ENSSSCG00000001509 7:34084220-34087457 CU607018,CH242-138E20,7:33930957-34116846
(Clone quality: bE138E20 on chr=7; Num_of_Contigs=1; ) 		 
DBC1   ENSSSCG00000005504 1:272897185-273000755    
DBH ENSSSCG00000004191 1:32774124-32858596    
DBH ENSSSCG00000005742 1:288513844-288532154    
DBI   ENSSSCG00000015719 15:23572436-23577766   CU861525,CH242-168K13,15:23527317-23663672
(Clone quality: bE168K13 on chr=15; Num_of_Contigs=2; )
DBNDD1   ENSSSCG00000002637 6:130905-132406   FP102308,CH242-96G18,6:122037-141818
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
DBNL ENSSSCG00000016721 18:47355882-47367807   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
DBP ENSSSCG00000003148 6:37718364-37722216    
DBP ENSSSCG00000008619 3:113249413-113258338    
DBT   ENSSSCG00000006866 4:122750420-122786920    
DBX1   ENSSSCG00000013350 2:36627173-36631193   CU571227,CH242-358C11,2:36606628-36644365
(Clone quality: bE358C11 on chr=2; Num_of_Contigs=10; )
DC2 ENSSSCG00000009145 8:97440140-97451351   CU463349,CH242-219F15,8:97430864-97459105
(Clone quality: bE219F15 on chr=8; Num_of_Contigs=4; )
DCAF13   ENSSSCG00000006048 4:34044067-34075174    
DCAF15   ENSSSCG00000013763 2:56955436-56963124   FP016000,CH242-10C10,2:56952814-57017364
(Clone quality: bE10C10 on chr=2; Num_of_Contigs=2; )
DCAF5   ENSSSCG00000002303 7:101069608-101141030    
DCAF7   ENSSSCG00000017294 12:12909322-12936266   CU929939,CH242-45G1,12:12889620-12949393
(Clone quality: bE45G1 on chr=12; Num_of_Contigs=5; )
DCAKD   ENSSSCG00000017340 12:16208989-16227922   CU463967,CH242-394M10,12:16196506-16272592
(Clone quality: bE394M10 on chr=12; Num_of_Contigs=5; )
DCBLD1 ENSSSCG00000004254 1:46242475-46290331   CU694620,CH242-40E16,1:46176101-46306057
(Clone quality: bE40E16 on chr=1; Num_of_Contigs=3; )
DCBLD2 ENSSSCG00000011977 13:118385573-118398549   CU469278,CH242-94N13,13:118385485-118398583
(Clone quality: bE94N13 on chr=13; Num_of_Contigs=19; )
DCC ENSSSCG00000001921 7:65557820-65791036    
DCC ENSSSCG00000004526 1:105203739-106113828    
DCC ENSSSCG00000004931 1:170390013-170403202   CU633232,CH242-191H9,1:170387390-170434800
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
DCC ENSSSCG00000004932 1:170410018-170452342    
DCDC1   ENSSSCG00000013324 2:27364728-27416414 CU466329,CH242-361H19,2:27335366-27528624
(Clone quality: bE361H19 on chr=2; Num_of_Contigs=10; ) 		 
DCDC2   ENSSSCG00000001085 7:20055850-20225475    
DCDC5   ENSSSCG00000013326 2:27697820-27749504    
DCHS2 ENSSSCG00000009000 8:64129049-64134617   CU928251,CH242-265D20,8:64113830-64172984
(Clone quality: bE265D20 on chr=8; Num_of_Contigs=7; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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