A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 9601 - 9700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
RAB28   ENSSSCG00000008733 8:4701096-4716939   FP085464,CH242-222K13,8:4634524-4724824
(Clone quality: bE222K13 on chr=8; Num_of_Contigs=3; )
RAB2A   ENSSSCG00000006232 4:75390466-75474542    
RAB30   ENSSSCG00000014900 9:17201549-17291140    
RAB32   ENSSSCG00000004117 1:19986491-20008415    
RAB33A   ENSSSCG00000012658 X:104880782-104891790    
RAB34   ENSSSCG00000017769 12:42638511-42642425   FP016171,CH242-62B5,12:42618725-42654541
(Clone quality: bE62B5 on chr=12; Num_of_Contigs=5; )
RAB36   ENSSSCG00000010048 14:50087986-50099343    
RAB37   ENSSSCG00000017233 12:4708500-4716534 CU928524,CH242-307O4,12:4671735-4885844
(Clone quality: bE307O4 on chr=12; Num_of_Contigs=13; ) 		 
RAB38   ENSSSCG00000014923 9:21587661-21624236    
RAB39   ENSSSCG00000015005 9:35942326-35968604    
RAB39B   ENSSSCG00000012810 X:123391991-123396214 CU861979,CH242-305A15,X:123389549-123544360
(Clone quality: bE305A15 on chr=X; Num_of_Contigs=11; ) 		 
RAB3A   ENSSSCG00000013897 2:62356629-62363278   CU915655,CH242-228H4,2:62349388-62376255
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
RAB3B   ENSSSCG00000003869 6:114002983-114059978    
RAB3C   ENSSSCG00000016928 16:35511972-35512199   CU914321,CH242-270D14,16:35409456-35535651
(Clone quality: bE270D14 on chr=16; Num_of_Contigs=4; )
RAB3D ENSSSCG00000013623 2:52312392-52322025    
RAB3GAP1   ENSSSCG00000015695 15:15103608-15153604    
RAB3GAP2   ENSSSCG00000010824 10:9783270-9874349    
RAB3IL1   ENSSSCG00000013074 2:7895299-7903442   CU914654,CH242-267E20,2:7861434-7908597
(Clone quality: bE267E20 on chr=2; Num_of_Contigs=5; )
RAB3IP   ENSSSCG00000000500 5:32847211-32898060    
RAB40C   ENSSSCG00000009116 8:90898795-90899639   CU467915,CH242-253M5,8:90869911-90967763
(Clone quality: bE253M5 on chr=8; Num_of_Contigs=1; )
RAB44   ENSSSCG00000001566 7:37021448-37034938 CU326356,CH242-61G11,7:36975834-37183903
(Clone quality: bE61G11 on chr=7; Num_of_Contigs=4; ) 		 
RAB4B   ENSSSCG00000002996 6:33680022-33690564   CU928654,CH242-130A3,6:33678287-33731769
(Clone quality: bE130A3 on chr=6; Num_of_Contigs=6; )
RAB5C   ENSSSCG00000017412 12:18346421-18368345   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
RAB6B   ENSSSCG00000011638 13:61420045-61479045   CU633685,CH242-265M20,13:61378623-61549248
(Clone quality: bE265M20 on chr=13; Num_of_Contigs=2; )
RAB7A   ENSSSCG00000011615 13:59266052-59336087    
RAB8A   ENSSSCG00000013848 2:60566824-60585810   CU856246,CH242-281F10,2:60562497-60591128
(Clone quality: bE281F10 on chr=2; Num_of_Contigs=6; )
RAB8B   ENSSSCG00000004566 1:112138577-112156112   CU606936,CH242-108A5,1:112133269-112189441
(Clone quality: bE108A5 on chr=1; Num_of_Contigs=6; )
RAB9A   ENSSSCG00000012123 X:9461203-9461808 CU633939,CH242-187N24,X:9427527-9513452
(Clone quality: bE187N24 on chr=X; Num_of_Contigs=4; ) 		 
RABAC1   ENSSSCG00000003046 6:34671296-34674226   FP015926,CH242-183C8,6:34669147-34686332
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
RABEP1   ENSSSCG00000017895 12:48725342-48802968    
RABEP2   ENSSSCG00000007806 3:16680596-16697708    
RABEPK   ENSSSCG00000005599 1:280715947-280738816    
RABGAP1   ENSSSCG00000015505 9:110058693-110082077    
RABGAP1L   ENSSSCG00000015499 9:109282531-109462850    
RABGEF1   ENSSSCG00000007735 3:14584364-14835951    
RABGGTA   ENSSSCG00000001992 7:81362672-81368874   CU019590,CH242-406B17,7:81281809-81421007
(Clone quality: bE406B17 on chr=7; Num_of_Contigs=4; )
RABGGTB   ENSSSCG00000003775 6:96114303-96123370   CU929611,CH242-276C23,6:96098364-96199408
(Clone quality: bE276C23 on chr=6; Num_of_Contigs=3; )
RABIF   ENSSSCG00000010932 10:24990068-24995627   CU986276,CH242-319L9,10:24954126-25023165
(Clone quality: bE319L9 on chr=10; Num_of_Contigs=6; )
RABL4   ENSSSCG00000000139 5:7363643-7384518    
RABL5   ENSSSCG00000007679 3:7282798-7286558   FP102957,CH242-63P23,3:7280869-7293451
(Clone quality: bE63P23 on chr=3; Num_of_Contigs=9; )
RAC1 ENSSSCG00000009229 8:114105524-114148502    
RAC1 ENSSSCG00000014624 9:2561209-2564779   CU972372,CH242-47M8,9:2561067-2567081
(Clone quality: bE47M8 on chr=9; Num_of_Contigs=7; )
RAC3 ENSSSCG00000007455 17:51928484-51932437   CU607037,CH242-23K15,17:51928344-51947555
(Clone quality: bE23K15 on chr=17; Num_of_Contigs=16; )
RACGAP1   ENSSSCG00000000217 5:14703906-14706709   CU457393,CH242-123B14,5:14700361-14712656
(Clone quality: bE123B14 on chr=5; Num_of_Contigs=20; )
RAD1   ENSSSCG00000016826 16:18041776-18049625   CU914241,CH242-186I1,16:17966592-18131621
(Clone quality: bE186I1 on chr=16; Num_of_Contigs=2; )
RAD17   ENSSSCG00000016960 16:44702893-44795230    
RAD21 ENSSSCG00000006014 4:21505023-21642997    
RAD21 ENSSSCG00000006015 4:21609768-21631187   CU656020,CH242-384B12,4:21609657-21632738
(Clone quality: bE384B12 on chr=4; Num_of_Contigs=11; )
RAD21 ENSSSCG00000007191 17:35731437-35763331    
RAD21L1   ENSSSCG00000007191 17:35731437-35763331    
RAD23A   ENSSSCG00000013747 2:56291244-56297121   CU463133,CH242-121E19,2:56264935-56304744
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
RAD23B   ENSSSCG00000005436 1:261064428-261108974   CU463059,CH242-243J20,1:261022081-261154690
(Clone quality: bE243J20 on chr=1; Num_of_Contigs=3; )
RAD50   ENSSSCG00000014280 2:122720889-122848994    
RAD51 ENSSSCG00000000722 5:61615870-61640464   CU915392,CH242-243A6,5:61597036-61647534
(Clone quality: bE243A6 on chr=5; Num_of_Contigs=1; )
RAD51 ENSSSCG00000002299 7:99998793-100042480   CT797462,CH242-97L17,7:99890302-100098604
(Clone quality: bE97L17 on chr=7; Num_of_Contigs=2; )
RAD51 ENSSSCG00000004766 1:137090000-137137217   CU633257,CH242-257P7,1:137003112-137140964
(Clone quality: bE257P7 on chr=1; Num_of_Contigs=3; )
RAD51AP1   ENSSSCG00000000722 5:61615870-61640464   CU915392,CH242-243A6,5:61597036-61647534
(Clone quality: bE243A6 on chr=5; Num_of_Contigs=1; )
RAD51AP2   ENSSSCG00000008616 3:111698216-111698650   CU856226,CH242-192F21,3:111679440-111698670
(Clone quality: bE192F21 on chr=3; Num_of_Contigs=9; )
RAD51C   ENSSSCG00000017646 12:32981853-33014598    
RAD51L1   ENSSSCG00000002299 7:99998793-100042480   CT797462,CH242-97L17,7:99890302-100098604
(Clone quality: bE97L17 on chr=7; Num_of_Contigs=2; )
RAD52   ENSSSCG00000000754 5:63902432-63925856   CU463193,CH242-251B18,5:63844856-63945660
(Clone quality: bE251B18 on chr=5; Num_of_Contigs=3; )
RAD54L   ENSSSCG00000003905 6:118215230-118243066   CU694667,CH242-117A15,6:118158784-118247648
(Clone quality: bE117A15 on chr=6; Num_of_Contigs=3; )
RAD54L2   ENSSSCG00000011425 13:28716979-28731168    
RAD9A   ENSSSCG00000012914 2:3504881-3510934   CU633429,CH242-6G2,2:3486771-3519792
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
RAD9B   ENSSSCG00000009824 14:31896749-31930523    
RADIL   ENSSSCG00000007575 3:2628919-3393079    
RAE1   ENSSSCG00000007503 17:60287281-60303373 CR956362,CH242-98D1,17:60206269-60416771
(No clone quality info on bE98D1) 		 
RAG1 ENSSSCG00000006529 4:98742216-98744330   CU179666,CH242-242M24,4:98705913-98751478
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
RAG1 ENSSSCG00000013289 2:23145858-23146631 FP102503,CH242-427N16,2:23115394-23146726
(Clone quality: bE427N16 on chr=2; Num_of_Contigs=4; ) 		 
RAG1AP1   ENSSSCG00000006529 4:98742216-98744330   CU179666,CH242-242M24,4:98705913-98751478
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
RAG2 ENSSSCG00000013287 2:23131149-23132732 FP102503,CH242-427N16,2:23115394-23146726
(Clone quality: bE427N16 on chr=2; Num_of_Contigs=4; ) 		 
RAGE   ENSSSCG00000002531 7:131508878-131681515    
RAI ENSSSCG00000003313 6:41814425-41815804   FP236123,CH242-107C1,6:41810249-41839566
(Clone quality: bE107C1 on chr=6; Num_of_Contigs=14; )
RAI ENSSSCG00000004655 1:128073308-128235567    
RAI ENSSSCG00000009581 14:768928-935245    
RAI14   ENSSSCG00000016824 16:17858299-17972970    
RAI2   ENSSSCG00000012153 X:13782736-13784331 CU207277,CH242-186H22,X:13637952-13829937
(Clone quality: bE186H22 on chr=X; Num_of_Contigs=1; ) 		 
RALBP1 ENSSSCG00000003680 6:67201402-67247419    
RALBP1 ENSSSCG00000004146 1:26816114-26897029    
RALBP1 ENSSSCG00000012150 X:12872405-13122217    
RALGAPA1   ENSSSCG00000001948 7:70183479-70242124 CT797476,CH242-73E24,7:70069396-70242489
(Clone quality: bE73E24 on chr=7; Num_of_Contigs=2; ) 		 
RALGPS1   ENSSSCG00000005607 1:281880030-282119599    
RALGPS2   ENSSSCG00000015523 9:113397661-113432052    
RALY ENSSSCG00000006149 4:53818628-54005841    
RALY ENSSSCG00000007275 17:39589418-39625176    
RALYL ENSSSCG00000006149 4:53818628-54005841    
RAMP1   ENSSSCG00000016331 15:129966458-129997166    
RAMP2   ENSSSCG00000017389 12:17691204-17693476   CU928483,CH242-17I6,12:17682845-17706351
(Clone quality: bE17I6 on chr=12; Num_of_Contigs=8; )
RAN   ENSSSCG00000009746 14:24358350-24361422   CU468532,CH242-32J1,14:24332288-24361510
(Clone quality: bE32J1 on chr=14; Num_of_Contigs=7; )
RANBP1   ENSSSCG00000010137 14:52748488-52754653   CT737345,CH242-178J1,14:52723116-52857619
(Clone quality: bE178J1 on chr=14; Num_of_Contigs=3; )
RANBP10   ENSSSCG00000002773 6:12947957-12961996    
RANBP17   ENSSSCG00000017000 16:49915586-50378853    
RANBP2   ENSSSCG00000008139 3:43038989-43042374   FP102256,CH242-427M21,3:43026663-43044768
(Clone quality: bE427M21 on chr=3; Num_of_Contigs=5; )
RANBP3   ENSSSCG00000013533 2:49555615-49563142   FP089464,CH242-231P22,2:49500853-49563374
(Clone quality: bE231P22 on chr=2; Num_of_Contigs=4; )
RANBP3L   ENSSSCG00000016838 16:18968670-19016951    
RANBP6   ENSSSCG00000005204 1:226007781-226011098   CU640420,CH242-37P4,1:226002179-226013154
(Clone quality: bE37P4 on chr=1; Num_of_Contigs=8; )
RANBP9   ENSSSCG00000001056 7:10143401-10261724    
RAP1A ENSSSCG00000006785 4:113081795-113156162   FP085509,CH242-232B23,4:113036619-113185587
(Clone quality: bE232B23 on chr=4; Num_of_Contigs=1; )
RAP1GAP2   ENSSSCG00000017847 12:46629051-46638183   CU655851,CH242-162H14,12:46626857-46639709
(Clone quality: bE162H14 on chr=12; Num_of_Contigs=7; )
RAP2A   ENSSSCG00000009506 11:67570524-67570841   CU633821,CH242-247J23,11:67570348-67574152
(Clone quality: bE247J23 on chr=11; Num_of_Contigs=15; )
Go to records:
1-100

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team